Gene Cpin_4593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4593 
Symbol 
ID8360766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5737025 
End bp5737549 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content45% 
IMG OID644966747 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_003124235 
Protein GI256423582 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.722115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACA AACCACTATC CGGGATAATG CTGGAGACAG AAAGGCTTGT GTTGCTGCAA 
TATACAGCTG ATTATAAACA GTCACTGCAA GCTATTCTTT CCAATGAAAG CATCATGCGA
TATGTGCTGA AAGGGCCCGT TTCAGCAGCT GATTATGATA GATTTATACA GTCTTATTTC
GGGCACACGG CAGACACATT TGGGATGGGT GTTTTACTCC ATAAAACCAC GCAGGAAGTG
ATTGGCTTTG CGGGTATTCA TCTTATAGAA ATGAATGGCC GCGAGCAGGC AGAAATAGGC
TTTGTGATTG AGCCTTCTTT TCAGGGGAAA GGTTATGCCA AAGAGATCGG CGAAGGGCAG
ATTCAGGCTG CCATTCGCAG TAACTATCCA CAGGTATATG CCACTGTGCA TCCGGAGAAT
ACTGCTTCTA AGGCAGTGAT CCGGAAACTG AATATGCACC TTGTTAATCC GGCCCTGCAT
ATTCCTGACA GGGGTATCAG GGAACTTTAT TGCTATGAGT CATAA
 
Protein sequence
MTDKPLSGIM LETERLVLLQ YTADYKQSLQ AILSNESIMR YVLKGPVSAA DYDRFIQSYF 
GHTADTFGMG VLLHKTTQEV IGFAGIHLIE MNGREQAEIG FVIEPSFQGK GYAKEIGEGQ
IQAAIRSNYP QVYATVHPEN TASKAVIRKL NMHLVNPALH IPDRGIRELY CYES