Gene Cpin_4586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4586 
Symbol 
ID8360759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5731318 
End bp5732361 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content47% 
IMG OID644966741 
ProductAlcohol dehydrogenase GroES domain protein 
Protein accessionYP_003124229 
Protein GI256423576 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0208069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCAAG CGAAAGCGTA TGCAGCACAG ACCCCTGAGT CCGATTTAGC ACCCTGGAAC 
TTTGAAAGAA GGGATGTTGG CAATCACGAT GTACAATTTG ATATCCTGTA CTGCGGCGTT
TGCCACTCTG ACCTGCATCA GATAAAAAAT GAATGGTTCC CCGGTATTTT CCCGATGGTG
CCTGGTCACG AGATTGTAGG TAAGGTATCA AAAGTAGGCC CTCATGTTAA GAAATATAAA
GTAGGCGACC TGGTAGGTGT TGGTTGCCTG GTAGACAGCT GCCGTAGCTG CGACAACTGT
AAAGACGGAC TGGAACAATA CTGTACCAAT GGTCACTCCC AGACTTATAA CGGTACCGAA
CAGGACCACA AAACACCTAC TTATGGTGGT TATTCCAATA CGATTGTAGT CAACGAAGAC
TTTGTACTGA AAATCAGCGA AAAGCTCAAC CTGGCTGCCG TAGCGCCATT ACTGTGTGCC
GGTATCACGA CTTACTCTCC GCTGAAATAC TGGAAAGTAG GTAAAGGTCA CAAACTGGCC
GTTGTTGGTC TGGGGGGTCT TGGACACATG GCAGTTAAAT TCGGCGTATC CTTCGGCGCG
GAAGTAACTG TACTGAGCAC TTCTGCTGCT AAAGAAGCAG ATGCAAAAGC ACTGGGCGCA
CATCACTTTG TTGTAACAAA AGATGAAGCA CAGTTCAAAG CGCAAATGGG TACTTTCGAT
TTCATCCTGG ATACCGTATC TGCCAAACAC GACATCAATG ACTACCTGGG TCTGCTGAAG
ACAAATGGTG TGATGATCTG TGTAGGCGTG CCGTCTGAGC CATCTCCGAT TGCTGCATTC
AGCATCATCG GCGGACGTAA GAGCCTGGCT GGTTCTTCCA TCGGCGGTCT TCCTGAAACG
CAGGAAATGC TTGACTATTG TGCTGAACAC AATATCGTGT CAGACATTGA GATCATCGAT
ATAAGGGATA TCACACCTTC TTATGAAAGG ATGATAAAAG GCGATGTAAA ATATCGTTTT
GTGATCGATA TGGCTACCTT GTAA
 
Protein sequence
MIQAKAYAAQ TPESDLAPWN FERRDVGNHD VQFDILYCGV CHSDLHQIKN EWFPGIFPMV 
PGHEIVGKVS KVGPHVKKYK VGDLVGVGCL VDSCRSCDNC KDGLEQYCTN GHSQTYNGTE
QDHKTPTYGG YSNTIVVNED FVLKISEKLN LAAVAPLLCA GITTYSPLKY WKVGKGHKLA
VVGLGGLGHM AVKFGVSFGA EVTVLSTSAA KEADAKALGA HHFVVTKDEA QFKAQMGTFD
FILDTVSAKH DINDYLGLLK TNGVMICVGV PSEPSPIAAF SIIGGRKSLA GSSIGGLPET
QEMLDYCAEH NIVSDIEIID IRDITPSYER MIKGDVKYRF VIDMATL