Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4574 |
Symbol | |
ID | 8360747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5718407 |
End bp | 5719489 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644966729 |
Product | 2-nitropropane dioxygenase NPD |
Protein accession | YP_003124217 |
Protein GI | 256423564 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGTATC AGACAAAAGC ATCGGAATTA TTAGGCATTA CGTATCCTGT TTTACAGGGG CCTTTTGGCG GTAATCTGTC CTCGGTGGAA TTGGTGGCTA CAGTGTCAAA TGCAGGCGGA TTAGGCGGCT TTGGAGCCTA TTCTATGAGT CCGCAGGAGA TCGCAGCCCT GGATGAGCAG ATCAGAAACG CCACTGATAA ACCGTATAAT ATCAATCTGT GGGTGAATGA TACAGATGCG GTTGATGGCA CGGTTACAGA CGAACAGTTT AGACACACGC AGGACGTCTT CCGGCCTTAT TTCGATCAAC TGGGTATTGC ATTACCTGAG AAGCCAGGAC CATTCCGCTC ACGGTTTGAA GACCAGGTAG CCGTGATCCT GGACCGGAAA CCACCGGTAT TCAGCTTTAT GTTTGGTATT CCATCCGCAG ATATACTGGA ACAATGTCGT AAGGCCGGTA TTGTCACAAT CGGCGCCGCT ACCACACCGG ATGAAGCGAT CGCGTTGGAA GCAGCAGGCG TAGATCTGAT CGTGGCTTCC GGGTTTGAGT CTGGTGGACA CCGTCCTTCC TTCCTCCAAT CTGCAGAAGC TTCTACAACC GGTACTTTCG TCCTGGTGCA ACTGATCAGA GAAAAGGTAA AGACCCCGGT GATCGCGGCA GGAGGCATTG CCAATGGAAA GGGAATTGCT GCGGCACTGA CACTGGGAGC AGATGCGGTG CAGATAGGTA CGGCCTTCCT GGCCTGTGAG GAATCAAATG CGACGCCTTT ACACAGGGAA ATGCTGTTCT CTGATGCAGC CCGACAAACC ACATTGACCC GCGCCTTTAC CGGTAGGTTG GGCCGGGGAA TCGCCAACAG GATTACTTCA ACGCTGGCGC CCGATACAAA GAACTTTCTG CCCTTTCCTT TACAGACTAC CTTCCTGTCA TCTCTACGTA AAGCGGCGCT TGAAAAGGAA CAGTGGGACA TGATCTATTT CTGGGGTGGT CAGATTGCCC CGTTATTAAA ACATAGAAAA GCCGCCGGAT TGATGCAATC GCTGCTGGAA GAAACAACAG CGTATTTCGG AGGTAGAAAA TAA
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Protein sequence | MWYQTKASEL LGITYPVLQG PFGGNLSSVE LVATVSNAGG LGGFGAYSMS PQEIAALDEQ IRNATDKPYN INLWVNDTDA VDGTVTDEQF RHTQDVFRPY FDQLGIALPE KPGPFRSRFE DQVAVILDRK PPVFSFMFGI PSADILEQCR KAGIVTIGAA TTPDEAIALE AAGVDLIVAS GFESGGHRPS FLQSAEASTT GTFVLVQLIR EKVKTPVIAA GGIANGKGIA AALTLGADAV QIGTAFLACE ESNATPLHRE MLFSDAARQT TLTRAFTGRL GRGIANRITS TLAPDTKNFL PFPLQTTFLS SLRKAALEKE QWDMIYFWGG QIAPLLKHRK AAGLMQSLLE ETTAYFGGRK
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