| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4563 |
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| Symbol | |
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| ID | 8360736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5708988 |
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| End bp | 5709740 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644966718 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003124206 |
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| Protein GI | 256423553 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.332785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.123242 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTGT ATTTAAAAGG AAAAACAGCA GTGGTGACCG GGGCCAGTCA GGGTATTGGC
CGCGCTATCG TGAAGGAATT GTCTATAGAA GGCGTGAAGG TATTTGCTAC CGCAAGAAAT
GCATCGTTAC TGGATAATCT GAAAGAAGAA ATAGCTGCCG CTGGCGGTAT TCCCCCCATC
ACTTTTGTAC AGGATTTTGT TGCTCCCGGA GGGCCACAGG CGATTGCAGA TGCTGTCCTG
GCTACCTTGG GACATGTTGA TATCCTGGTG AATAATGCGG GCCGCAGCCG TCCGCTGGAT
GTAATCGGGG AGGAGGATGC CTGGAATGCT TCCCTGACGC TCGATTTCGG ACATCATCGT
CAGCTGACAC AGGCACTATT GCCGCAATTG ATGGAACGCA GACAAGGGGC TATTCTCAAT
ATCGCCAGTA CCTATGAACT GCGTAGTGTC AATGCCTCAG CCGTTGCCAA AGCAGCCCTG
GTGGTCTGGT CTAAACAACT GGCGGCCCAG CTGGGACCAT ATGGTATCCG GGTAAATTGT
CTGCAGCCCG GATTGATCGA TACAGAAAAT ATCCGCCCTT TTTTCCGGGG AGATGCCCGG
CAGCAATTTG CATCACAGGA AATCCCTTTG GGTGATTTTG GTGAACCTCA GGATATGGCC
AATATGGCGA CATTCCTGGT TTCTCCCCGT GCGAAGTATA TCACGGGTAC GGTCGCTGTG
GTAGATGGTG GTATGCGCCA TCATCCTTTC TGA
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| Protein sequence | MDLYLKGKTA VVTGASQGIG RAIVKELSIE GVKVFATARN ASLLDNLKEE IAAAGGIPPI
TFVQDFVAPG GPQAIADAVL ATLGHVDILV NNAGRSRPLD VIGEEDAWNA SLTLDFGHHR
QLTQALLPQL MERRQGAILN IASTYELRSV NASAVAKAAL VVWSKQLAAQ LGPYGIRVNC
LQPGLIDTEN IRPFFRGDAR QQFASQEIPL GDFGEPQDMA NMATFLVSPR AKYITGTVAV
VDGGMRHHPF
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