Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4561 |
Symbol | |
ID | 8360734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5705919 |
End bp | 5707799 |
Gene Length | 1881 bp |
Protein Length | 626 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644966716 |
Product | acyltransferase 3 |
Protein accession | YP_003124204 |
Protein GI | 256423551 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1835] Predicted acyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.064478 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.244827 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTTATA TGAAATTTAG GTACGATATC AATGCACTGC GTGCTATTGC AGTTTTGTCA GTAATGCTTT TTCATTTCGG AGTAACGCGT TTCGAAGGAG GTTTTTCCGG AGTAGACGTT TTCTTCGTTA TTTCAGGTTA TCTGATGACC CGTATTATTG CAGGCGGTCT TGATAATAAT ACCTTTTCCC TGGTGGATTT CTATGGAAAG CGATTAAAGC GAATCGTGCC CGCTTTACTG GTGCTGGTGG GCGTATTAAT GCTCGTTAAC TTTTTTGTTA CCTTCCCCGT TGATTACCAT GTAACATCGA AGAATGGACT CAGTAGCCTC CTGTTTGTGT CGAATATTGT CTATTGGAGG AACTCAAGTT ACTTTGCGCC CGCATCAGAT ACCAATATCT TTTTACATAC CTGGTCCCTG TCAGTAGAAT GGCAGTTTTA CCTTTTATAC CCCATCTTCC TGAGATGGTT CAATAAGACA ATTAGTGATA AAAAAAGAAA CTTCAGCATC TTCACGGGTC TGACACTCGT GTTGGCACTT GGCTCTTTTC TGTTTACTAA AATGGATGCA ACCGCCTCTT TCTACCTCCT GCCATCCCGT GCATGGGAAA TGATGGCGGG GGGCGTAGCA TTTTACCTGG AAGGACGTGT GAGTGACCGC AGGAAACAAA TCGGGCTTGC ACTGGCCGGA TACGGTATTA TCTTTTTTTC TATCCTGTTC ATCAAAAGAG GTACGACCTG GCCGGGTGTT TATACCTTAT TACCGGTAGT TGGTACATTC ATGGTCATCA TTGCGAACTG GAATGATTTG AAACTGATCA AACTGGGTGT TGTACAGTTC TTTGGAAAGA TATCCTATTC GCTTTATCTG TGGCATTGGC CGGTCGTGGT AATGGCCACT TATTTTGGTA TTACCAGGAA TAAAACCTCC CTGCTGGCTT TTATCGCCAT CGCTATTGTA CTGGCATTGC TGTCTTATAA GTTCATTGAA GCGCTTAAAT ATGAGAGCAA TAAGAAGATC CTGGTAGCCG TATCTGCGAT GTCTGCCGTT GTGCTGGTAT TGATGCTGAG TAACGCGAAT GCCTTTCTGT TCACAGAAAA GAGTAAACAA CTGTCTGCCT ATGAACAGGC GCATGAAATG GAAAAAAGTC AGATGTTCAG ACAGGATACC TGCTTTATTA TGATCGGCAC AGATAAGAAA TTTGACAGGG AACACTGCCT GTGTCTGAAA GACTCCGTCA AAAACGTATT GCTCATTGGC GATAGCCATG CTGCACAGCT TTGGGGACCT TTGTCTGCCA GTCTGCGTAA CCGCGGTATT CTTTTGAGTC AGGCTACAGG CAGCAGCTGT GTCCCTGTCA TGAAAAGTAA TGTACCGGGC CATTGTGATG ACGTCATCAA TTACATATAC AACGAGTATA TTGAAAAACA TGCAGCAGAA ATAGACGGCG TGATATTGAC GGCCAACTGG GTCAATGAAG TCAATAACAG TCCGGCCTTG CTGAAAGACC TGCAGAAAAC ATTACAGTTC CTCGATAAGT ACCATTTCAA TGTCATGCTG ATAGGGCAGA CGGAAACCTA TACCATGAGT TATCCATACA TAGCTGCCTG GGAAAGCGAA CTGAATATGC CGCTGACCGC TAAGTTCCGT ACGCCGCAAT CGGAACAGAT GGATCAGTTC CTGAAGAAGA ATTTCTCCTC TCTTTATATC GACGTTTATA ATAAGGATTC TGTTCCTGTG GTCTCTGATC AGAATGTGCC TTACATGTTC GATGAACACC ACGTTACGCC TTATGGTGCA ACATTGCTCG TTGATCGTGT ATTTGCAGAT CCGATCGGCG CCAGCTTCCT CAACAAGGTG TTAAACCATA AACGTATATA A
|
Protein sequence | MFYMKFRYDI NALRAIAVLS VMLFHFGVTR FEGGFSGVDV FFVISGYLMT RIIAGGLDNN TFSLVDFYGK RLKRIVPALL VLVGVLMLVN FFVTFPVDYH VTSKNGLSSL LFVSNIVYWR NSSYFAPASD TNIFLHTWSL SVEWQFYLLY PIFLRWFNKT ISDKKRNFSI FTGLTLVLAL GSFLFTKMDA TASFYLLPSR AWEMMAGGVA FYLEGRVSDR RKQIGLALAG YGIIFFSILF IKRGTTWPGV YTLLPVVGTF MVIIANWNDL KLIKLGVVQF FGKISYSLYL WHWPVVVMAT YFGITRNKTS LLAFIAIAIV LALLSYKFIE ALKYESNKKI LVAVSAMSAV VLVLMLSNAN AFLFTEKSKQ LSAYEQAHEM EKSQMFRQDT CFIMIGTDKK FDREHCLCLK DSVKNVLLIG DSHAAQLWGP LSASLRNRGI LLSQATGSSC VPVMKSNVPG HCDDVINYIY NEYIEKHAAE IDGVILTANW VNEVNNSPAL LKDLQKTLQF LDKYHFNVML IGQTETYTMS YPYIAAWESE LNMPLTAKFR TPQSEQMDQF LKKNFSSLYI DVYNKDSVPV VSDQNVPYMF DEHHVTPYGA TLLVDRVFAD PIGASFLNKV LNHKRI
|
| |