Gene Cpin_4561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4561 
Symbol 
ID8360734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5705919 
End bp5707799 
Gene Length1881 bp 
Protein Length626 aa 
Translation table11 
GC content44% 
IMG OID644966716 
Productacyltransferase 3 
Protein accessionYP_003124204 
Protein GI256423551 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.064478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.244827 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTATA TGAAATTTAG GTACGATATC AATGCACTGC GTGCTATTGC AGTTTTGTCA 
GTAATGCTTT TTCATTTCGG AGTAACGCGT TTCGAAGGAG GTTTTTCCGG AGTAGACGTT
TTCTTCGTTA TTTCAGGTTA TCTGATGACC CGTATTATTG CAGGCGGTCT TGATAATAAT
ACCTTTTCCC TGGTGGATTT CTATGGAAAG CGATTAAAGC GAATCGTGCC CGCTTTACTG
GTGCTGGTGG GCGTATTAAT GCTCGTTAAC TTTTTTGTTA CCTTCCCCGT TGATTACCAT
GTAACATCGA AGAATGGACT CAGTAGCCTC CTGTTTGTGT CGAATATTGT CTATTGGAGG
AACTCAAGTT ACTTTGCGCC CGCATCAGAT ACCAATATCT TTTTACATAC CTGGTCCCTG
TCAGTAGAAT GGCAGTTTTA CCTTTTATAC CCCATCTTCC TGAGATGGTT CAATAAGACA
ATTAGTGATA AAAAAAGAAA CTTCAGCATC TTCACGGGTC TGACACTCGT GTTGGCACTT
GGCTCTTTTC TGTTTACTAA AATGGATGCA ACCGCCTCTT TCTACCTCCT GCCATCCCGT
GCATGGGAAA TGATGGCGGG GGGCGTAGCA TTTTACCTGG AAGGACGTGT GAGTGACCGC
AGGAAACAAA TCGGGCTTGC ACTGGCCGGA TACGGTATTA TCTTTTTTTC TATCCTGTTC
ATCAAAAGAG GTACGACCTG GCCGGGTGTT TATACCTTAT TACCGGTAGT TGGTACATTC
ATGGTCATCA TTGCGAACTG GAATGATTTG AAACTGATCA AACTGGGTGT TGTACAGTTC
TTTGGAAAGA TATCCTATTC GCTTTATCTG TGGCATTGGC CGGTCGTGGT AATGGCCACT
TATTTTGGTA TTACCAGGAA TAAAACCTCC CTGCTGGCTT TTATCGCCAT CGCTATTGTA
CTGGCATTGC TGTCTTATAA GTTCATTGAA GCGCTTAAAT ATGAGAGCAA TAAGAAGATC
CTGGTAGCCG TATCTGCGAT GTCTGCCGTT GTGCTGGTAT TGATGCTGAG TAACGCGAAT
GCCTTTCTGT TCACAGAAAA GAGTAAACAA CTGTCTGCCT ATGAACAGGC GCATGAAATG
GAAAAAAGTC AGATGTTCAG ACAGGATACC TGCTTTATTA TGATCGGCAC AGATAAGAAA
TTTGACAGGG AACACTGCCT GTGTCTGAAA GACTCCGTCA AAAACGTATT GCTCATTGGC
GATAGCCATG CTGCACAGCT TTGGGGACCT TTGTCTGCCA GTCTGCGTAA CCGCGGTATT
CTTTTGAGTC AGGCTACAGG CAGCAGCTGT GTCCCTGTCA TGAAAAGTAA TGTACCGGGC
CATTGTGATG ACGTCATCAA TTACATATAC AACGAGTATA TTGAAAAACA TGCAGCAGAA
ATAGACGGCG TGATATTGAC GGCCAACTGG GTCAATGAAG TCAATAACAG TCCGGCCTTG
CTGAAAGACC TGCAGAAAAC ATTACAGTTC CTCGATAAGT ACCATTTCAA TGTCATGCTG
ATAGGGCAGA CGGAAACCTA TACCATGAGT TATCCATACA TAGCTGCCTG GGAAAGCGAA
CTGAATATGC CGCTGACCGC TAAGTTCCGT ACGCCGCAAT CGGAACAGAT GGATCAGTTC
CTGAAGAAGA ATTTCTCCTC TCTTTATATC GACGTTTATA ATAAGGATTC TGTTCCTGTG
GTCTCTGATC AGAATGTGCC TTACATGTTC GATGAACACC ACGTTACGCC TTATGGTGCA
ACATTGCTCG TTGATCGTGT ATTTGCAGAT CCGATCGGCG CCAGCTTCCT CAACAAGGTG
TTAAACCATA AACGTATATA A
 
Protein sequence
MFYMKFRYDI NALRAIAVLS VMLFHFGVTR FEGGFSGVDV FFVISGYLMT RIIAGGLDNN 
TFSLVDFYGK RLKRIVPALL VLVGVLMLVN FFVTFPVDYH VTSKNGLSSL LFVSNIVYWR
NSSYFAPASD TNIFLHTWSL SVEWQFYLLY PIFLRWFNKT ISDKKRNFSI FTGLTLVLAL
GSFLFTKMDA TASFYLLPSR AWEMMAGGVA FYLEGRVSDR RKQIGLALAG YGIIFFSILF
IKRGTTWPGV YTLLPVVGTF MVIIANWNDL KLIKLGVVQF FGKISYSLYL WHWPVVVMAT
YFGITRNKTS LLAFIAIAIV LALLSYKFIE ALKYESNKKI LVAVSAMSAV VLVLMLSNAN
AFLFTEKSKQ LSAYEQAHEM EKSQMFRQDT CFIMIGTDKK FDREHCLCLK DSVKNVLLIG
DSHAAQLWGP LSASLRNRGI LLSQATGSSC VPVMKSNVPG HCDDVINYIY NEYIEKHAAE
IDGVILTANW VNEVNNSPAL LKDLQKTLQF LDKYHFNVML IGQTETYTMS YPYIAAWESE
LNMPLTAKFR TPQSEQMDQF LKKNFSSLYI DVYNKDSVPV VSDQNVPYMF DEHHVTPYGA
TLLVDRVFAD PIGASFLNKV LNHKRI