| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4547 |
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| Symbol | |
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| ID | 8360720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5679426 |
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| End bp | 5680559 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966702 |
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| Product | anti-FecI sigma factor, FecR |
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| Protein accession | YP_003124190 |
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| Protein GI | 256423537 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.719196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0835387 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGAG AGGAACTCTT ATTACTAACG GAAAAAATCG CATCAGGTAC CGCTACTGAC
GAGGAGCTGA TGCAGTTTAA CCGTTTGTTT GACGCCTTCC GGCTAGCAGC GGAATGGGAT
GAGACCCTAC TTGGCAACCG GCAGATGATC GGCGACACGA TCCGGGAAAG GATACAGGTT
GTTATAGAAA GACCTGCAGT CCGCATAGTA CCCTGGCGCA GGTGGATGAT TGCCGCCAGC
ATAGCGGTAT TGTTAAGCGG CGGTTACTTT TATTACCGTA CCCTCCAACA TCCTGTACTG
GCACCTCAGG CAGAAAGATT TAAAAATGAC GTAGCGGCCC CTGCGGGCCA TCATGCCGTA
CTGACGCTGA GCAATGGTAC CAAAATACTA TTGGACAGTG CCGGCAAAGG CACCCTCGCT
ATGCAGGGTA GTATAAATGT CAGCATGAAT GCCAACGGAC AGATCGTATA TAATGGCGAA
GACAATACAA ACGCCACCAA CACCATCGAA GTGCCGCCTG GCAGTCAGCC GTTAGCGATT
GTACTCTCAG ATGGCACAAA AGTATGGATA GATGCGGCAT CCACCCTGAC TTATCCGACC
GCATTCAGCG GCAACGATAG AACAGTGAAC ATTATCGGTC AGGCTTATTT TGAAGTAGCC
CCCAACAGCA GGAAGCCGTT TAAAGTAAAG AATGGCATAG ATCAATCGAC CATAGAAGTA
CTGGGTACGA GTTTTAACAT AAAAGCCTTC GGGCCTGATA AACAAACAGA AACAAACCTG
TTCAGCGGAG CTGTTGCCAT CTCCACCACC AATGCAAGGC AACTGCTTCA TCCGGGTGAA
CGGGCAGTCG TGAACAATGA GGGTGCTATA CAAATTACGA CTGGAGCAGA CATGAAAGAA
GTACTGGCAT GGAAGGAAGG CATTTTCTAT TTCAATGGGA AAGATATTCC GGCTATCATG
ACTGAACTGC AACGCTATTA TGATATAGAA GTTGAGTATC AGACAAACGT AAACGATGAA
TTCATCGCCA GTATTCCGAG AGACGTCCCG GTGTCTCAAC TACTGAACCT GCTGGAGATG
ACAAATCTCG TGCACTTCAG GATCGAAGGC CGAAAGGTTA TCGTGATCAG ATAG
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| Protein sequence | MTREELLLLT EKIASGTATD EELMQFNRLF DAFRLAAEWD ETLLGNRQMI GDTIRERIQV
VIERPAVRIV PWRRWMIAAS IAVLLSGGYF YYRTLQHPVL APQAERFKND VAAPAGHHAV
LTLSNGTKIL LDSAGKGTLA MQGSINVSMN ANGQIVYNGE DNTNATNTIE VPPGSQPLAI
VLSDGTKVWI DAASTLTYPT AFSGNDRTVN IIGQAYFEVA PNSRKPFKVK NGIDQSTIEV
LGTSFNIKAF GPDKQTETNL FSGAVAISTT NARQLLHPGE RAVVNNEGAI QITTGADMKE
VLAWKEGIFY FNGKDIPAIM TELQRYYDIE VEYQTNVNDE FIASIPRDVP VSQLLNLLEM
TNLVHFRIEG RKVIVIR
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