Gene Cpin_4535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4535 
Symbol 
ID8360708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5657312 
End bp5658790 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content50% 
IMG OID644966690 
ProductCarboxylesterase 
Protein accessionYP_003124178 
Protein GI256423525 
COG category[I] Lipid transport and metabolism 
COG ID[COG2272] Carboxylesterase type B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00512052 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATTGTT CCTCGTTTCG CGCGCTCATT TCCTGTTTGT GCCTGCTACC GGCGCTTACG 
CTTTCTGCTC AGTCCACCAC TGTTATCAAA ACAAGCCGCG GTTATGTGCG CGGTGCTGTT
GAAAAAGATG TCACGGTTTT TAAAGGTATT CCTTATGCGG CGCCACCTGT CGGTGCACTA
CGTTTCAAAG CGCCTGTCGA AACACCTGCC TGGAAGGATA CCTTATCCTG TACCAGCTTT
GGTGCTCCCG CCGCTCAATA CAACGGGGAG AACCAGGGTG TAAGAGGCGA TGAAAACTGT
CTGACGCTAA ACCTCTATAC GCCTGACGTT CTACCTGCTA AAAAGATGCC TGTCGTAGTA
TGGGTACATG GCGGCGGTAT GACTGGTGGC AGCGGTATGG GGATGAATGG CCATGCATTC
GCAGATAAAG ACAGCATCAT CTGTATTACG ATCAATTATC GTTTAGGTGT ATTCGGCTTT
CTCTATATGG GTGATATTCC CGGGTATGAA ACATCGGGGA ATAACGGTCT GCAGGATTGT
ATGATGGCTT TACAATGGAT CAGGAAAAAT ATCCGTGCTT TCGGCGGCGA TCCTTCGAGG
GTAAGTGTGA TGGGAGAATC CGCCGGGGCA AAACTAATAT CTGCGTTACT GGTGGCTCCT
GCCGCAAAAG GTAGTTTTCG TCAGTTGATA CTGGAAAGCG GCTCCGTGAA CTGTATCCGT
GATATTGCCA CCGCAAAAGC CATACGGCAG CGGCTGATGG ATACCTTAGG TATCAGTGAT
CCGGCGGCAC TGCTGCAGTT ACCGGCTACC ACCCTGATAC CGGCACAGGC GAAGATATTA
GGCGGGCCGA AAGGCACTAA TTACTTTGGT CCGGTTACAG ACGGCCTTGT CATCAAAGAA
GATGCACTGG CTTATGTGAA AAAACATCCT AAAAAAAAGG TACGGGTACT GTTGGGTACC
AATAAAGCGG AAGCGATCCT TTTTATGAAT ATGGACCGTC GTCTGTATAC ACCGGATTCC
GCTTCGCTGA GCGACTGGTT TGGTGATAAT TACAAGTATA GTTATGCCGC CTGGAAACGC
ATCCAGGACC GTCCGAAAGA TACTGCTGCC ATCATCACGT TAAGCCGTTA TATGTACCAG
TTACATACTT TCCGGCTGGC AAAAGCACTG GCTGCCGCTA GTAGAAACGT GTGGTTGTAT
TCGTTTCAAC AGCCCAAGAA TGGGGCACCT GCGACACATG CCGACGAACT GGCCTATATC
TGGTATATTC CTGGTGAAGG TCATCCCCCT GCTAATCCGG CCCTGGCGAC ACTGATGCAT
CAACAGTGGT GTGATTTCAT CAAAGGCCGT CAGCTATGGC CGCATTACGA TGCTGCTAAA
ACAGGGATGG TTTTCGGTGA AAACAGCCAT GTTACCACAC CAGATGACTA CGAAGATCCG
GAGCATCCTA CCATGGGCTT TATCCTGCAT GGCAAATGA
 
Protein sequence
MNCSSFRALI SCLCLLPALT LSAQSTTVIK TSRGYVRGAV EKDVTVFKGI PYAAPPVGAL 
RFKAPVETPA WKDTLSCTSF GAPAAQYNGE NQGVRGDENC LTLNLYTPDV LPAKKMPVVV
WVHGGGMTGG SGMGMNGHAF ADKDSIICIT INYRLGVFGF LYMGDIPGYE TSGNNGLQDC
MMALQWIRKN IRAFGGDPSR VSVMGESAGA KLISALLVAP AAKGSFRQLI LESGSVNCIR
DIATAKAIRQ RLMDTLGISD PAALLQLPAT TLIPAQAKIL GGPKGTNYFG PVTDGLVIKE
DALAYVKKHP KKKVRVLLGT NKAEAILFMN MDRRLYTPDS ASLSDWFGDN YKYSYAAWKR
IQDRPKDTAA IITLSRYMYQ LHTFRLAKAL AAASRNVWLY SFQQPKNGAP ATHADELAYI
WYIPGEGHPP ANPALATLMH QQWCDFIKGR QLWPHYDAAK TGMVFGENSH VTTPDDYEDP
EHPTMGFILH GK