Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4535 |
Symbol | |
ID | 8360708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5657312 |
End bp | 5658790 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644966690 |
Product | Carboxylesterase |
Protein accession | YP_003124178 |
Protein GI | 256423525 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2272] Carboxylesterase type B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00512052 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATTGTT CCTCGTTTCG CGCGCTCATT TCCTGTTTGT GCCTGCTACC GGCGCTTACG CTTTCTGCTC AGTCCACCAC TGTTATCAAA ACAAGCCGCG GTTATGTGCG CGGTGCTGTT GAAAAAGATG TCACGGTTTT TAAAGGTATT CCTTATGCGG CGCCACCTGT CGGTGCACTA CGTTTCAAAG CGCCTGTCGA AACACCTGCC TGGAAGGATA CCTTATCCTG TACCAGCTTT GGTGCTCCCG CCGCTCAATA CAACGGGGAG AACCAGGGTG TAAGAGGCGA TGAAAACTGT CTGACGCTAA ACCTCTATAC GCCTGACGTT CTACCTGCTA AAAAGATGCC TGTCGTAGTA TGGGTACATG GCGGCGGTAT GACTGGTGGC AGCGGTATGG GGATGAATGG CCATGCATTC GCAGATAAAG ACAGCATCAT CTGTATTACG ATCAATTATC GTTTAGGTGT ATTCGGCTTT CTCTATATGG GTGATATTCC CGGGTATGAA ACATCGGGGA ATAACGGTCT GCAGGATTGT ATGATGGCTT TACAATGGAT CAGGAAAAAT ATCCGTGCTT TCGGCGGCGA TCCTTCGAGG GTAAGTGTGA TGGGAGAATC CGCCGGGGCA AAACTAATAT CTGCGTTACT GGTGGCTCCT GCCGCAAAAG GTAGTTTTCG TCAGTTGATA CTGGAAAGCG GCTCCGTGAA CTGTATCCGT GATATTGCCA CCGCAAAAGC CATACGGCAG CGGCTGATGG ATACCTTAGG TATCAGTGAT CCGGCGGCAC TGCTGCAGTT ACCGGCTACC ACCCTGATAC CGGCACAGGC GAAGATATTA GGCGGGCCGA AAGGCACTAA TTACTTTGGT CCGGTTACAG ACGGCCTTGT CATCAAAGAA GATGCACTGG CTTATGTGAA AAAACATCCT AAAAAAAAGG TACGGGTACT GTTGGGTACC AATAAAGCGG AAGCGATCCT TTTTATGAAT ATGGACCGTC GTCTGTATAC ACCGGATTCC GCTTCGCTGA GCGACTGGTT TGGTGATAAT TACAAGTATA GTTATGCCGC CTGGAAACGC ATCCAGGACC GTCCGAAAGA TACTGCTGCC ATCATCACGT TAAGCCGTTA TATGTACCAG TTACATACTT TCCGGCTGGC AAAAGCACTG GCTGCCGCTA GTAGAAACGT GTGGTTGTAT TCGTTTCAAC AGCCCAAGAA TGGGGCACCT GCGACACATG CCGACGAACT GGCCTATATC TGGTATATTC CTGGTGAAGG TCATCCCCCT GCTAATCCGG CCCTGGCGAC ACTGATGCAT CAACAGTGGT GTGATTTCAT CAAAGGCCGT CAGCTATGGC CGCATTACGA TGCTGCTAAA ACAGGGATGG TTTTCGGTGA AAACAGCCAT GTTACCACAC CAGATGACTA CGAAGATCCG GAGCATCCTA CCATGGGCTT TATCCTGCAT GGCAAATGA
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Protein sequence | MNCSSFRALI SCLCLLPALT LSAQSTTVIK TSRGYVRGAV EKDVTVFKGI PYAAPPVGAL RFKAPVETPA WKDTLSCTSF GAPAAQYNGE NQGVRGDENC LTLNLYTPDV LPAKKMPVVV WVHGGGMTGG SGMGMNGHAF ADKDSIICIT INYRLGVFGF LYMGDIPGYE TSGNNGLQDC MMALQWIRKN IRAFGGDPSR VSVMGESAGA KLISALLVAP AAKGSFRQLI LESGSVNCIR DIATAKAIRQ RLMDTLGISD PAALLQLPAT TLIPAQAKIL GGPKGTNYFG PVTDGLVIKE DALAYVKKHP KKKVRVLLGT NKAEAILFMN MDRRLYTPDS ASLSDWFGDN YKYSYAAWKR IQDRPKDTAA IITLSRYMYQ LHTFRLAKAL AAASRNVWLY SFQQPKNGAP ATHADELAYI WYIPGEGHPP ANPALATLMH QQWCDFIKGR QLWPHYDAAK TGMVFGENSH VTTPDDYEDP EHPTMGFILH GK
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