| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4533 |
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| Symbol | |
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| ID | 8360706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5655499 |
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| End bp | 5656095 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644966688 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_003124176 |
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| Protein GI | 256423523 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0169871 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCA CTCCCAGATC CGAAACGACC AGGCAATTAA TTATAGAATC AGTCGCTAAC
CTGATGAACA GACAGGGATA TGCCGGTACG TCTATTACGG ATCTGGAGAA GGCAACCGGG
TTGACAAAGG GCAGTATCTA TGGTAATTTT GAAAATAAGG AGCAGATTGC TTATGCTGTG
TTTGATTATA ACCTGCTCCG GCTGAGGCAG GCTATCAGCA ATGCGATGGA CAAGTGTGGT
ACTTATAAGG ATAAATTACT GGCTAATATC GCGGTATATT ATGGTAGTAT GGATAGCAGC
GGTGGCGGCT GTCCGATGAT GAATACTGCG GTTGAAGCAG ATGATACGCA TGAAGGTCTG
AGAAAGAGAG CTGCTGAAGG TTTACTGAGA TGGAAGCAGG ATTTGACCGC TGTCATTGAA
AAAGGTATGG CTGCCAATGA ATTTAAAAAA GATACCGACG TACAAAAAAC AGCACTCACC
ATTATCGCCC TGATAGAAGG CGCTATTCTG ATAGGTAAAG CCACGCAGAA TCCCGTTTTC
CTTGATGTAA TACTCACCAC TGCCAAAGAG ACCGTCCAGG GCATTTCCCA ACATTAA
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| Protein sequence | MKFTPRSETT RQLIIESVAN LMNRQGYAGT SITDLEKATG LTKGSIYGNF ENKEQIAYAV
FDYNLLRLRQ AISNAMDKCG TYKDKLLANI AVYYGSMDSS GGGCPMMNTA VEADDTHEGL
RKRAAEGLLR WKQDLTAVIE KGMAANEFKK DTDVQKTALT IIALIEGAIL IGKATQNPVF
LDVILTTAKE TVQGISQH
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