Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4533 |
Symbol | |
ID | 8360706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5655499 |
End bp | 5656095 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644966688 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003124176 |
Protein GI | 256423523 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0169871 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATTCA CTCCCAGATC CGAAACGACC AGGCAATTAA TTATAGAATC AGTCGCTAAC CTGATGAACA GACAGGGATA TGCCGGTACG TCTATTACGG ATCTGGAGAA GGCAACCGGG TTGACAAAGG GCAGTATCTA TGGTAATTTT GAAAATAAGG AGCAGATTGC TTATGCTGTG TTTGATTATA ACCTGCTCCG GCTGAGGCAG GCTATCAGCA ATGCGATGGA CAAGTGTGGT ACTTATAAGG ATAAATTACT GGCTAATATC GCGGTATATT ATGGTAGTAT GGATAGCAGC GGTGGCGGCT GTCCGATGAT GAATACTGCG GTTGAAGCAG ATGATACGCA TGAAGGTCTG AGAAAGAGAG CTGCTGAAGG TTTACTGAGA TGGAAGCAGG ATTTGACCGC TGTCATTGAA AAAGGTATGG CTGCCAATGA ATTTAAAAAA GATACCGACG TACAAAAAAC AGCACTCACC ATTATCGCCC TGATAGAAGG CGCTATTCTG ATAGGTAAAG CCACGCAGAA TCCCGTTTTC CTTGATGTAA TACTCACCAC TGCCAAAGAG ACCGTCCAGG GCATTTCCCA ACATTAA
|
Protein sequence | MKFTPRSETT RQLIIESVAN LMNRQGYAGT SITDLEKATG LTKGSIYGNF ENKEQIAYAV FDYNLLRLRQ AISNAMDKCG TYKDKLLANI AVYYGSMDSS GGGCPMMNTA VEADDTHEGL RKRAAEGLLR WKQDLTAVIE KGMAANEFKK DTDVQKTALT IIALIEGAIL IGKATQNPVF LDVILTTAKE TVQGISQH
|
| |