| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4531 |
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| Symbol | |
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| ID | 8360704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5648934 |
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| End bp | 5650778 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644966686 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003124174 |
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| Protein GI | 256423521 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.056511 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0821101 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGA CTATTGCAAA AATATATATC GCGGGCGCAC TGTTACTGGG TGCTGCCTTG
CAGACGGGTT GTGTAAAAGA CCTGCTGGAC AGGGAGCCGG CTACAGAACT GGGTACCGGC
GCTTTCTGGA AATCAGAGGC AGATGCGACG TATGCCCTGA TGGGCGCTTA CGCAGATATC
CGCCCGCTGT TTGACCGTGA CTATTACTTC GACGGACAAG CAGAATACCT GCGCGTTAGA
GGTACCAGTA CCGCCAGTGG TAACCTGCAG AAAGGAGATG CGTATAACGG TGGTGATTAT
AGTCCGTCGG GATATGGCGA CAACTTCGAC AAAATGTATG AACGCCTGTA TGGCGGTGTA
CACCGTGCTA ATTATGTTAT CGAAAACGTC CGTAAGATGT TGCCTGCTGC CAGTGGTACC
GCGCTGATAC AACTGGAACG CATTGTTGGC GAAGCGAGTC TGTTGAGGGC CATGGTGTAT
TTCCGGCTGA TCTCGATGTG GGGAGATGTG CCCTATATTG ATCATGTCAT TTTTGACAAT
GCGGAGGTAG CCAACCTTAC GCGTACGCCT ATTAGCGAGG TAAAAGATTC CATTATAGCT
GACCTGACCT ATGCCTTTGA AAAACTCCCG GTGAAGGCCC CCGAGATTGG CCGTGCCTCC
AAACCGGCGG CACTGGCCTT CCGGGGCAAA GTACAATTGT ACTGGGCCTG CTGGAATACC
TACGGATGGC CTGAACTGGA TACTTTCCAG CCGGATGCGG CCCAGGGTAC AGATGCATAC
AGAGCAGCGG CGGCTGACTT AAAGAAGGTC ATCAATGATT ATGGCCTGAA CCTCTTCAGA
GGCGGTGAAC CGGGTGAGTG TGACGTATTG GGGAAAGCAG ATAAACTGCC GAACTACTAT
TACCTGTTTA CGCCGGTGGC GAATGGAGAT CCTGAAATGA TCATGGCTTT CAGTCATGGA
GGCACCGGTA CGAACCAGGG AGAAGAACTG ATGCGCGATA TCGCTGGTCG TTCTCATGAA
GGTTCACAAT GCTGGGTATC CCCCCGTTAT GAGATCGCAG ATCGTTATCA GTCGACGATC
ACAGGTGATT TCGCAGATAA GATGATCCCT ATGAATCCAG CGAATAATGC TGCTGCCAGG
ACTACCTTGA ATTCAGCTGT CAATCCACAG ACTTATACCA ACCGCGATTA TCGTATGAAG
TCTTCTATCA TGTGGGACTA TGAGATCAGT GTGGGCATGA TCTCATTGAA ATCAACCGGG
TGGGTACCTT TTATCTACCG TACCTGGAAT CAGCCGGTAA CGATCGATGG GGCGAGTTAT
ATCACCTATA ATACGGATGG TTGTAATTCC GGTTATGTAT TGCGCAAGTT CCTGCGAAAT
ACTGCCGGAC TGGGACGTAG CGACGGTACC TATAATTACC CGGTAATGCG GTTGGCCGAT
GTATTCCTGA TGTATGCAGA GGCGACGAAT GCAGTGGATG GTCCGCAGGG AGATGCCATC
GCACTGCTGA ACAGGATACG GCATAGAGGT AATCTGCCGC CATTGGCTGC GGACAAAACG
GCCAGTAAAG AAGCATTCTT TAATGCGATC GAGCAGGAGC GTATCGTAGA ACTGTTTGGC
GAAGGCCACC GTGCTTTTGA CCTGCGCCGA TGGAGAGCGA TCGAACGGGT ATGGAACCCG
CCTTATGGTA ACGGCGTATG GCGTATCGAT ACTTATGGCG CACAGATGAC GCGTTACTTC
CAGAATGTAT CGGAAAGGGA ATACCAGCAA TGTTACATCT TCCGCATTCC GCCGGGAGAG
CGTAACAGAA ATCCTAATCT TACACAAAAC ACACCATGGC TCTAA
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| Protein sequence | MKQTIAKIYI AGALLLGAAL QTGCVKDLLD REPATELGTG AFWKSEADAT YALMGAYADI
RPLFDRDYYF DGQAEYLRVR GTSTASGNLQ KGDAYNGGDY SPSGYGDNFD KMYERLYGGV
HRANYVIENV RKMLPAASGT ALIQLERIVG EASLLRAMVY FRLISMWGDV PYIDHVIFDN
AEVANLTRTP ISEVKDSIIA DLTYAFEKLP VKAPEIGRAS KPAALAFRGK VQLYWACWNT
YGWPELDTFQ PDAAQGTDAY RAAAADLKKV INDYGLNLFR GGEPGECDVL GKADKLPNYY
YLFTPVANGD PEMIMAFSHG GTGTNQGEEL MRDIAGRSHE GSQCWVSPRY EIADRYQSTI
TGDFADKMIP MNPANNAAAR TTLNSAVNPQ TYTNRDYRMK SSIMWDYEIS VGMISLKSTG
WVPFIYRTWN QPVTIDGASY ITYNTDGCNS GYVLRKFLRN TAGLGRSDGT YNYPVMRLAD
VFLMYAEATN AVDGPQGDAI ALLNRIRHRG NLPPLAADKT ASKEAFFNAI EQERIVELFG
EGHRAFDLRR WRAIERVWNP PYGNGVWRID TYGAQMTRYF QNVSEREYQQ CYIFRIPPGE
RNRNPNLTQN TPWL
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