Gene Cpin_4530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4530 
Symbol 
ID8360703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5648515 
End bp5648943 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content45% 
IMG OID644966685 
Producthypothetical protein 
Protein accessionYP_003124173 
Protein GI256423520 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.119377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.078761 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTAA CTTTTCAATC CACAACAATG AAATACTGTT TAACAATCCT ATTACTCCTG 
ACTATAGGCA GCTGGATGGG CTGCCGCAAA GAAGCGCCTG TTGATGAAGA TGGGCTGCTG
ATCACTAGCC GTGCGGAGTG TTATGTCAGC AATTTTGAAT TACTGGGCGC CGATTTTCAG
ACGGTGCGTA CCAAAAATGC GGTGATAGAT ACGATAGCCT GTACAGTGGA TGTGACAGTC
TTTTATGGCA CAGACCTGAA ACATTTGTAT CCGCAGTTTA CGCTAGTGAC GGATGCGAAG
CTGGATCCAA AGATCACCGG GTTTACTGAT TTTTCAGACC TGGGGAATCC GAAGACTTAC
AGCGTGATAT CGGGTAACAG ACAGGTAAGA AAGACTTATA AGGTAAATGT TACCGTACAG
CCCAGATAG
 
Protein sequence
MALTFQSTTM KYCLTILLLL TIGSWMGCRK EAPVDEDGLL ITSRAECYVS NFELLGADFQ 
TVRTKNAVID TIACTVDVTV FYGTDLKHLY PQFTLVTDAK LDPKITGFTD FSDLGNPKTY
SVISGNRQVR KTYKVNVTVQ PR