Gene Cpin_4528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4528 
Symbol 
ID8360701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5646288 
End bp5647496 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content53% 
IMG OID644966683 
Producthypothetical protein 
Protein accessionYP_003124171 
Protein GI256423518 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.679058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0430352 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTTT TTTATGCCGG GACCTTGTTG CTGCTGGGGA TGATCATCTG CCTGTATACA 
GCAGCGGCAC AGTTGCCCCC ACAAACCTAT CTGCTCAAAG GGCAGCAGTT GCTGGATGCG
AAAGAGAAGA TTGCAAAGAA AGACCCCGCC ATGCAGCAGG CTTTGGCTGC CTTGCTGAAA
ATAGCAGACC AGTCGCTGGA GAATGGCCCT TACTCGGTTG TCTACAAAAC CAAAGTGCCG
CCCAGTGGTA ACAAACACGA CTATATGAGC GTAGGGCCTT ACTGGTGGCC TGATTCTACC
AAGGCCAACG GATTGCCCTA TATCCGTAAG GATGGGCAGG TCAATCCGGA ACGGTATGCC
ATTAAAGATG ACGAGTACCA GAATGCCATT TCACGCGACG TATATTACCT CGGACTCGCC
TGGTTTTATA CCGGGAAGGA GCAATATGCG AAACATGCGG CTGGTCTGCT CCGGACCTGG
TTCCTTGACA CGGCCACGAG TATGCATCCG CACCTGAATT ATAGTCAGGC GATACCGGGC
ATTACGGATG GCAGGGGCAT AGGACTGATC GATACCCATA ATGTGACCAT GCTGCTGGAT
GGTATTCAGT TGCTGAAAGC GTCAAAGGCC CTTTTGGCAG CAGAATACAA AAGAATACAA
GACTGGTACC GGGCATTCCT GCAATGGATG CGTACGAGTC CGATCGGACA GGATGAAGCA
GATGAAGGGA ATAACCACGG TACCTGGTAT GATGTACAGC AGGTAGCGAT CGCTTTATTT
ACCGAACAGC CGGCGCTGGC CAGACAGATA CTGGAACAGC AGACGAAAAA GCGGATAGAG
GTACAGCTGG AAACAGATGG CCGTCAGCCG AAAGAGCTGG CCCGGACCTT ATCCTGGAAC
TATTCCCTTT TTAACCTGCG GGCCTTCTTT GAACTGGCCC TGCTGGCAGA AAATGTACAG
GTGGACCTCT GGCATTATGA GACGCCGGCG GGTAAAAGTC TGCAGAGCGC CTACCGCTGG
CTACTGCCGT TTGCTACCGG GGCCAGCCAG TGGGCTTATC AGCAGATCAA GCCCAAACAT
GACGAGGAAT TCCTGGAACT ATCGGAGGTG GCTGCCCGAA AGTACCCGGA TCTGGACCTC
AGCGCCCTGA AAGTGCAGCA CAAAGACTAC CAAAATGACT TATTATTGCT GACGCACTGG
GCGTACTAA
 
Protein sequence
MPVFYAGTLL LLGMIICLYT AAAQLPPQTY LLKGQQLLDA KEKIAKKDPA MQQALAALLK 
IADQSLENGP YSVVYKTKVP PSGNKHDYMS VGPYWWPDST KANGLPYIRK DGQVNPERYA
IKDDEYQNAI SRDVYYLGLA WFYTGKEQYA KHAAGLLRTW FLDTATSMHP HLNYSQAIPG
ITDGRGIGLI DTHNVTMLLD GIQLLKASKA LLAAEYKRIQ DWYRAFLQWM RTSPIGQDEA
DEGNNHGTWY DVQQVAIALF TEQPALARQI LEQQTKKRIE VQLETDGRQP KELARTLSWN
YSLFNLRAFF ELALLAENVQ VDLWHYETPA GKSLQSAYRW LLPFATGASQ WAYQQIKPKH
DEEFLELSEV AARKYPDLDL SALKVQHKDY QNDLLLLTHW AY