Gene Cpin_4512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4512 
Symbol 
ID8360685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5624200 
End bp5625288 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content44% 
IMG OID644966667 
Productmajor royal jelly protein 
Protein accessionYP_003124155 
Protein GI256423502 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.551554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.750053 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA ACTTTATTGC CGCTGTGCTG GCTGTTACTA TGACGGGGAT GATCGCCTGT 
TCCAAAGATG ATGATCACGG AGAACGTAAG CTGGAGCTGA TGTTTGAGGA CAATACCTAT
CAACTGACAG GTGTAGCGAA AGAAGAGAAC GGGCGTTTGC TGGTGAATTA TCCACGCTGG
TCTGATATTT ATCAATACGC CGTTGTCATA ACGAATGGCA AAACCGGAAA GACGCCTTAT
CCTGATGTAG CAACGAATCA ATGGAGCCAT GGATTATCAG GTCTTAATAA ATGGGTGTGT
GTGCAATCTG TTTATTTTGA CAAAGCAGGA ACGCTCTGGA TATTAGACCC GGCAGCTCCG
AAATTGGAAA CGATCCAGGG AAATGGCGCC AAGCTGGTGA GGATGGATAA GCAGTCGAAT
ACAATCGCAC GTACTTATTC TTTTACGCCT ATCCTGGCTG ATACTTCCTA TGTCAACGAT
GTACGTGTTG ACGTGGAAAG ACAATATGCT TACCTGACTG AATCGAAAGG AGGGGGCATT
ATTGTGGTGA ACCTGGCTGA CGGACAAATG CGTCGTGTAT TGCAGGCGCA CTATTCCACG
ATTTCTGATC CTTCTTATAA ATTCATTATT GATGGCCGGG AGCTGATGAA AGATGGTAAA
CCTGCCAAAT TCAATTCGGA CGGTATTGCA TTGACACCTG ATGGGAACTG GTTGTATTAT
AAGCCATTAT CGGATGATAA GCTTTACCGC ATTAAAACAG AACATCTGCG TAACCCAGGT
ATGACGGCTA TGGATCTGGA ATCGCAGGTG GAGGACCTGG GACATTTTAC AACAACCGAC
GGAATGATCT TCGATGAAAA AGGCAACCTT TACATGGGAG ATCTCCAGGG ATACCGGATC
GTTAAACTGG ATAGTGCGCT GCGGATGACG ACACTTGTCA AAGATGACAG ATTGATCTGG
CCTGATAGCT ATTCTATAGC AGATGGCTAT TTATACATCA GTTGTTCCCA GATCCAGAAA
CAACCTGAAT ATAATAATGG CGTTGACAAA CGTACCTCTC CTTATACTGT ATACAGGATA
AAAATATAG
 
Protein sequence
MKNNFIAAVL AVTMTGMIAC SKDDDHGERK LELMFEDNTY QLTGVAKEEN GRLLVNYPRW 
SDIYQYAVVI TNGKTGKTPY PDVATNQWSH GLSGLNKWVC VQSVYFDKAG TLWILDPAAP
KLETIQGNGA KLVRMDKQSN TIARTYSFTP ILADTSYVND VRVDVERQYA YLTESKGGGI
IVVNLADGQM RRVLQAHYST ISDPSYKFII DGRELMKDGK PAKFNSDGIA LTPDGNWLYY
KPLSDDKLYR IKTEHLRNPG MTAMDLESQV EDLGHFTTTD GMIFDEKGNL YMGDLQGYRI
VKLDSALRMT TLVKDDRLIW PDSYSIADGY LYISCSQIQK QPEYNNGVDK RTSPYTVYRI
KI