| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4503 |
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| Symbol | |
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| ID | 8360676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5605122 |
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| End bp | 5606945 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966658 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003124146 |
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| Protein GI | 256423493 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.468205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.602053 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGTA AGATATATTT AAGCATCATC ATAATATTCA CCCTGCTGAT ACAACCCGCC
TGTCATGACC TGAATGTAGA ACCCCTGAAT GTGATCCAGG ATAAGGACGT TTTTGGCACA
GAGGCTGGTG TGGCAGGTTA CATGGCAACG ATCTATAAAG CATTGCCGAT TGAAGACTTC
TTTTATCAGC AGGCAAATTC CGGATTTAAC CGTGGATGGG AACAATTCTA TCATCCTGGT
GCACTCTGTG GCGAAATGGT AGGTCCATAT GGTAGTACAT ATGATGGCGC CGGAGGATTT
GGTTACTGGC CCTACGGAGA TATCCGCACG GTGAATTATT TCCTGGAAAA CCTGCCGGTA
TTTGGTGCGG GATTTTCCAA AGAACAGATA GACGCCTGGA TGGGGGAAGC CTATTTCTGC
CGTGCTTATT TCTACTTCGC ACTGGTGAAA CGCTACGGGG GTATTCCTAT CATTAAACAG
GTACAGCATT ATCCGGAGCA AAGTCTGGAA GAATTGCAGG TACACCGCGA TAAGGAAGTA
GACGTCTGGA ATTTTGTGGC AGCTGATCTG GACAGCGCTT ATAAGAAGAT GCCGGAGACC
AGTCCCAGAG GACGGGCCAA CCGTTATGTA GCAGCGGCAT TGAAATCAAG AGCCATGTTA
TATGCTGGTA CAATTGCGAA ATATGGTTCG GCGAACTTTG TTGAGGGAGA AGCCAGAACA
CTGGGTTATG TAGGTATTCC GGCGTCTGCG GCACAGGGTT TCTTTCAGCG TGCATGGGAT
GCTGCGAAGC TGTTGGAAGG ACACTATAGC CTGTATCGTA AAAAGTCAGA TAAAGAACAA
AACTACGTAG ATCTTTTCCT GGATAAGGAA AGCACAGAAA ATATACTCGT ACGCGACTAT
TCCCTCACCA GCAACACCGC ACATAGCTGG GACGCTACAA TGACCTGCCG CTTTATGACC
GCTGATGGTT TGTCCCGTGC TTATCCAACA CTGGAACTGA TCGAGCGTTT TAACGGACAA
TTACCGGTCG TAAATGCAGA TGGTACACCC CGTCGTTTTG ATAATACGGC TCAGCTGATG
CAGGGCGTAG AACCAAGGTT ACTGGCAACC GTTTATTTCC CCGGTGCTTC GCTGAGAGGA
AAACAATTTG ATATGCAGCG GGGTATCTAT GAGCATTTCC AGGGTACTGC CCAGGATGAA
GCAGGACAGA ACCCGCCGAA CCGCCAATAC AGACACCTGG CAGGTAAAAC GGAAACCCTC
TACGATGGTA TGCGCATTAT TGGTTTTACC GGTATCAGTA CGGATGATGA TAACCTGACC
CGTACCGGTT TTTATGTAAG GAAATATATC GACTATAACC GTGCACAATC TGCCTGCGGA
TTGTACATGA GTACACAAAG CTGGATCGAT ATGCGCTACG CGGAAGTACT GCTGAACAGG
GCAGAGGCGG CAGTAGAATT GAATAACCTC TCTGATGCAA GAACGGTGGT GAATGACCTG
AGAGACAGGG CGGGCGCTCC GCAGTTGACG GCAGATCCTG ACATAGATAC TGTCAGGAAT
GAGCGCTGTA AAGAACTGGC TTTTGAAAAA CAATACTGGT GGGACCTGAG AAGATGGCGT
ATTGCGGACA GAATGCTGGA TAATACCAAA TACCACGCAT TGATGCCTTA TTATGTGGCA
GATGAAAAGA AGTACATCTT CCTGCGTGAA ATGGAGCCCT TCCAGCGTTC TTACAACTTT
GAGAAAAAGT TCTATTACGA GCCGATCCCT GGCGGAGAAC TGGGTAAGAA CCCCAATCTG
TTCCCCAACA ATCCTAACCA TTAA
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| Protein sequence | MKSKIYLSII IIFTLLIQPA CHDLNVEPLN VIQDKDVFGT EAGVAGYMAT IYKALPIEDF
FYQQANSGFN RGWEQFYHPG ALCGEMVGPY GSTYDGAGGF GYWPYGDIRT VNYFLENLPV
FGAGFSKEQI DAWMGEAYFC RAYFYFALVK RYGGIPIIKQ VQHYPEQSLE ELQVHRDKEV
DVWNFVAADL DSAYKKMPET SPRGRANRYV AAALKSRAML YAGTIAKYGS ANFVEGEART
LGYVGIPASA AQGFFQRAWD AAKLLEGHYS LYRKKSDKEQ NYVDLFLDKE STENILVRDY
SLTSNTAHSW DATMTCRFMT ADGLSRAYPT LELIERFNGQ LPVVNADGTP RRFDNTAQLM
QGVEPRLLAT VYFPGASLRG KQFDMQRGIY EHFQGTAQDE AGQNPPNRQY RHLAGKTETL
YDGMRIIGFT GISTDDDNLT RTGFYVRKYI DYNRAQSACG LYMSTQSWID MRYAEVLLNR
AEAAVELNNL SDARTVVNDL RDRAGAPQLT ADPDIDTVRN ERCKELAFEK QYWWDLRRWR
IADRMLDNTK YHALMPYYVA DEKKYIFLRE MEPFQRSYNF EKKFYYEPIP GGELGKNPNL
FPNNPNH
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