| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4499 |
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| Symbol | |
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| ID | 8360672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5601859 |
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| End bp | 5602449 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644966654 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003124142 |
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| Protein GI | 256423489 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.878271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.799417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAGGAA TGTTAGATAA CGAAACAGCT TTACTGGAAA AGATGGCGGC AGGTGACAGA
GATGCCTTTC AGGCGATCTA TTATCATTAT GCACCCCGTA TTTATGGTAA GCTGCTGAAG
TTATTACATT CTGAAGACCT CGCTACTGAA CTGCTCCAGG AGGTGTTCAT TGTCGTATGG
CAGAAACATA CCGTTATTGA CCCCAATCGC TCATTCAGGT CCTATTTATT CAAAATAGCA
GACAATCTGG CCATAGATCT CTTCAGAAAG GCTAACCGCA GTACCCAGCT GCTGAACCGG
CTCCTGGAAG CCAGTATTGA CCATTACACG CACACAGAAG AAAGACTGGA ACAGAAAGAG
AATGCATTTC TGCTCCAGCA GGCCGTAGAC GCCTTACCCC CGCAACGTAA ACTGGTATTT
ACCCTCTGTA AACTGGAGGG GAAGAGTCAT GATGAAGTTA GTCTGTTACT GGGCATTTCT
CCATCTACCG TTAATAATCA TATAGTTAAG GCCACCAGAT TCCTGCGGGA ATACCTGGCG
GACCACCCGG ATATCGCCGG TATTATCCTG CTCTATTTTA TTTTAAAATA A
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| Protein sequence | MSGMLDNETA LLEKMAAGDR DAFQAIYYHY APRIYGKLLK LLHSEDLATE LLQEVFIVVW
QKHTVIDPNR SFRSYLFKIA DNLAIDLFRK ANRSTQLLNR LLEASIDHYT HTEERLEQKE
NAFLLQQAVD ALPPQRKLVF TLCKLEGKSH DEVSLLLGIS PSTVNNHIVK ATRFLREYLA
DHPDIAGIIL LYFILK
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