| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4496 |
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| Symbol | |
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| ID | 8360669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5595439 |
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| End bp | 5596809 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644966651 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003124139 |
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| Protein GI | 256423486 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.162209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.240118 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACTA TAAAACAACT TTTATATATC ACATTGGGCA GTGCGTCCCT GCTCTGGAAT
ACAGGATGCC GCAGTTATGT GGAGGTGAAT CCGCAGGGTA AAAGAGCATT GGTGAATACA
ACCGATTATC AGCTCCTTTT GCAAAGCGAC AATGATATGG CGCCTTCTTT CAGCTTCCCT
GTTTATGCAG CGGATGACTA TGGCGTGAGC TATGATCCTT TTGAAAACAG TATGCTGACC
GCACAGGCGA ATGCCTATAT CTGGGCAGAA ACGATCGTCG CCGAGGCAGA TGATCCGGAC
TGGACCCGTT TTTATAAACA GATCTATACC TGTAATACGA TCATAGAGGG TGTACGTAGC
AGCCAGGGTG GTACCACACA ACAAAAAGAA GTGGTGCGCA GTCAGGCCCT TGTACACCGC
GCCTATGCTT ACCTGATGCT GGTAAATGGG TACGCCCGTC AGTATGAAAA GGCGACGGCA
GCAACAGCGC CGGGAGTGCC TTTACTGCTG AAGCCCGATC TTTTTGCGTC ACTGAACAGG
GCTTCTGTAC AGGCAGTATA TGATCAGATC ATGGCGGATC TGAAAGAGGC AGCGCCGGTT
TTACCAACAC AGGCGACTAT TACATTACTA CCATCCTCCA CAGCCGCATA TGCCCTGATG
GCCCGTGCAT CGCTTTATAT GGGAGCGTAT GCAAACGCAG CTGCCTATGC TGACAGCGCG
TTAAGCAGGC AATCAACCTT ACTGGATCTG AAGGTCTATG CCGGTAGTCC GTCTACCATG
CCGACCGTAT ACAAAGATCC TGAAATCATG CTGGTGAAAA ATGTCGGCGC TTCCGTAACC
TATGCATTGA ATCCTGACCT GGTAAAACTG TTCGAAACCG GTGACCTGCG TTACGATCTG
TATACGGCAG ATGGCTCCAG TTTCCAATGG TCTTCTTTCC CTGGTCGTGG TTACTGGCGT
ACCAGACTGA CACTGGCTTC CGGCGCTTAT ACCGGTCCGG GTGTAGGTGA AATGATGCTG
ACGCTGGCGG AATGTGATGC ACGTACAGGT AAGACAGCGG AAGCAGTTTC CCTCTTGAAT
AAACTGAGAG AGAAGCGTTT TACGGCGGCT GACTATGTCG CACTGGATAC GAATGACGCT
GAGGAAGCGC TTCGCCTTGT GCTGACAGAA CGTCGTCGTG AACTGATGGC CAGTGGTCTG
CGTTGGTTTG ATCAGAAGCG GCTGAACCTG GATCCAAAGT ATACGGTAAC GGTTAGTCGT
ACCTACCGCG GACAAACCTA TACTTTAACG CCTAACAGCA ATCGTTACGT TTTTCCGATT
CCGGCAAAAA ATATCCAATT TAACCCGGAG CTCGCACAGA ATCCGAGATA A
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| Protein sequence | MSTIKQLLYI TLGSASLLWN TGCRSYVEVN PQGKRALVNT TDYQLLLQSD NDMAPSFSFP
VYAADDYGVS YDPFENSMLT AQANAYIWAE TIVAEADDPD WTRFYKQIYT CNTIIEGVRS
SQGGTTQQKE VVRSQALVHR AYAYLMLVNG YARQYEKATA ATAPGVPLLL KPDLFASLNR
ASVQAVYDQI MADLKEAAPV LPTQATITLL PSSTAAYALM ARASLYMGAY ANAAAYADSA
LSRQSTLLDL KVYAGSPSTM PTVYKDPEIM LVKNVGASVT YALNPDLVKL FETGDLRYDL
YTADGSSFQW SSFPGRGYWR TRLTLASGAY TGPGVGEMML TLAECDARTG KTAEAVSLLN
KLREKRFTAA DYVALDTNDA EEALRLVLTE RRRELMASGL RWFDQKRLNL DPKYTVTVSR
TYRGQTYTLT PNSNRYVFPI PAKNIQFNPE LAQNPR
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