Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4493 |
Symbol | |
ID | 8360666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5588850 |
End bp | 5590316 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644966648 |
Product | monooxygenase FAD-binding |
Protein accession | YP_003124136 |
Protein GI | 256423483 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.575117 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0380746 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCGG AACAAACATT TGATGTATTG ATCATCGGCG CCGGTCCTGC CGGTAGCTGT GCCGCCTTAC GCCTTCTTTC CCTTGGATAC AATGTGGTAT TGACAGAAAG CGAACCCTTT CCCCGTCCGC AGATCGGTGA ATCACTGTCT CCTGGTATCC GGAATATCTT TGATTACCTG AACGCGGGTG ACCTGCTTCA TACACGTCAT TACCTGCATC AGCTGCATGC ACAGGTTATC TGGGATACAC CAACTCCACA ACTGGTCAAT ACCGCACAAC GTGGTGCAGG TGTCATGGTG GACAGGGCAC AACTGGATCA GGACCTGCTG CAACTGGCGG TTAACCGGGG TTTACACTTA TATCAACCTG CCCGCTTCGA ATCCTGTAAA AGGACGGAAG AGACATGGAC CTCCACACTC AGAACGGACA CGGGCATCAT CAGTATCAGC TCCCGCTTTA TACTGGATGC CCGCGGCCGT CGTGGGAATC ATATGCAGGA CAGGGTATTA ACAGCACCAC AGACGGTAGC GATGTGGGCT GAGTTACCCG GACAATCCCT GCCAACAGAT ACCCTTATTG AAGCAAGACC CGAAGGATGG ATATGGGGCT CCCCTACACC CGGAGGATCA TGCAGGATCA TCACTTTTAC AGATCCGGAA ACCATCCGGC AACAGCCCCT GGTAAAGGTA TTCAGTGGTA TCCTTTCCGC AACGAACTTA TTTGCTGCGG CAGCAGACAT TCCCATTTCC GGCATCCAAA CCTGTAGCGT ATTTACTTAC GCGCATACGG ATCCCTGGAA GGACAATTAC CTGCGCCTGG GAGAAGCTGC CTTTTCACTG GACCCGCTGT CTTCTACCGG TGTAGAAAAA GCGATGCGTT TTTCCCTGCA GGCGGTTATT GCCATCAATA CTATTCTGAA AACAGATCAG ACGAGTATGG CGCAGTCCTT CTACGAAAAT AAGATGATCG AATCCATTGC CAGTCATACC CACTGGACCA GTGGCTACTA TGCCCAGGCA TGGCCGGGAC AGGGACACCC TTTCTGGCAG AGACGATCCC TGCCCTATAT TGACACTCCC GGACAGTCCA CACCATTCTA CAACAGACTA AAAGACAAGT TTAACCCGGC TCCGCCGCCT GGTCCGCAGC GACGTATCAA CGTGCAACAG GAATTACCCC GTTTATGGCA TGAAACCGTA CAGCTATCCC CATCCCTGAT ATTTGAAGAA GTACCCTGCG TGATCGACGA TATGCTGCAA TTGCGTACGG CTATCCGGCA CCCTAATCTT GACCGGGAGA TTGCCTATGT AGAAGAGGTA GAGCTCTCTC CTTTGCTTTC TATGGCCAAT AAAAGCGCTA CTTTTGGCGC CATTGTGGAA GAGTGGAGTA AACTACTGCC TTTTGAACAG GCGGTCCGTA TCGCCTTCTT TTTGTGGGAT AAAGACATTC TGTGCGAAAT GCCTTAG
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Protein sequence | MTPEQTFDVL IIGAGPAGSC AALRLLSLGY NVVLTESEPF PRPQIGESLS PGIRNIFDYL NAGDLLHTRH YLHQLHAQVI WDTPTPQLVN TAQRGAGVMV DRAQLDQDLL QLAVNRGLHL YQPARFESCK RTEETWTSTL RTDTGIISIS SRFILDARGR RGNHMQDRVL TAPQTVAMWA ELPGQSLPTD TLIEARPEGW IWGSPTPGGS CRIITFTDPE TIRQQPLVKV FSGILSATNL FAAAADIPIS GIQTCSVFTY AHTDPWKDNY LRLGEAAFSL DPLSSTGVEK AMRFSLQAVI AINTILKTDQ TSMAQSFYEN KMIESIASHT HWTSGYYAQA WPGQGHPFWQ RRSLPYIDTP GQSTPFYNRL KDKFNPAPPP GPQRRINVQQ ELPRLWHETV QLSPSLIFEE VPCVIDDMLQ LRTAIRHPNL DREIAYVEEV ELSPLLSMAN KSATFGAIVE EWSKLLPFEQ AVRIAFFLWD KDILCEMP
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