Gene Cpin_4493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4493 
Symbol 
ID8360666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5588850 
End bp5590316 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content51% 
IMG OID644966648 
Productmonooxygenase FAD-binding 
Protein accessionYP_003124136 
Protein GI256423483 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.575117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0380746 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGG AACAAACATT TGATGTATTG ATCATCGGCG CCGGTCCTGC CGGTAGCTGT 
GCCGCCTTAC GCCTTCTTTC CCTTGGATAC AATGTGGTAT TGACAGAAAG CGAACCCTTT
CCCCGTCCGC AGATCGGTGA ATCACTGTCT CCTGGTATCC GGAATATCTT TGATTACCTG
AACGCGGGTG ACCTGCTTCA TACACGTCAT TACCTGCATC AGCTGCATGC ACAGGTTATC
TGGGATACAC CAACTCCACA ACTGGTCAAT ACCGCACAAC GTGGTGCAGG TGTCATGGTG
GACAGGGCAC AACTGGATCA GGACCTGCTG CAACTGGCGG TTAACCGGGG TTTACACTTA
TATCAACCTG CCCGCTTCGA ATCCTGTAAA AGGACGGAAG AGACATGGAC CTCCACACTC
AGAACGGACA CGGGCATCAT CAGTATCAGC TCCCGCTTTA TACTGGATGC CCGCGGCCGT
CGTGGGAATC ATATGCAGGA CAGGGTATTA ACAGCACCAC AGACGGTAGC GATGTGGGCT
GAGTTACCCG GACAATCCCT GCCAACAGAT ACCCTTATTG AAGCAAGACC CGAAGGATGG
ATATGGGGCT CCCCTACACC CGGAGGATCA TGCAGGATCA TCACTTTTAC AGATCCGGAA
ACCATCCGGC AACAGCCCCT GGTAAAGGTA TTCAGTGGTA TCCTTTCCGC AACGAACTTA
TTTGCTGCGG CAGCAGACAT TCCCATTTCC GGCATCCAAA CCTGTAGCGT ATTTACTTAC
GCGCATACGG ATCCCTGGAA GGACAATTAC CTGCGCCTGG GAGAAGCTGC CTTTTCACTG
GACCCGCTGT CTTCTACCGG TGTAGAAAAA GCGATGCGTT TTTCCCTGCA GGCGGTTATT
GCCATCAATA CTATTCTGAA AACAGATCAG ACGAGTATGG CGCAGTCCTT CTACGAAAAT
AAGATGATCG AATCCATTGC CAGTCATACC CACTGGACCA GTGGCTACTA TGCCCAGGCA
TGGCCGGGAC AGGGACACCC TTTCTGGCAG AGACGATCCC TGCCCTATAT TGACACTCCC
GGACAGTCCA CACCATTCTA CAACAGACTA AAAGACAAGT TTAACCCGGC TCCGCCGCCT
GGTCCGCAGC GACGTATCAA CGTGCAACAG GAATTACCCC GTTTATGGCA TGAAACCGTA
CAGCTATCCC CATCCCTGAT ATTTGAAGAA GTACCCTGCG TGATCGACGA TATGCTGCAA
TTGCGTACGG CTATCCGGCA CCCTAATCTT GACCGGGAGA TTGCCTATGT AGAAGAGGTA
GAGCTCTCTC CTTTGCTTTC TATGGCCAAT AAAAGCGCTA CTTTTGGCGC CATTGTGGAA
GAGTGGAGTA AACTACTGCC TTTTGAACAG GCGGTCCGTA TCGCCTTCTT TTTGTGGGAT
AAAGACATTC TGTGCGAAAT GCCTTAG
 
Protein sequence
MTPEQTFDVL IIGAGPAGSC AALRLLSLGY NVVLTESEPF PRPQIGESLS PGIRNIFDYL 
NAGDLLHTRH YLHQLHAQVI WDTPTPQLVN TAQRGAGVMV DRAQLDQDLL QLAVNRGLHL
YQPARFESCK RTEETWTSTL RTDTGIISIS SRFILDARGR RGNHMQDRVL TAPQTVAMWA
ELPGQSLPTD TLIEARPEGW IWGSPTPGGS CRIITFTDPE TIRQQPLVKV FSGILSATNL
FAAAADIPIS GIQTCSVFTY AHTDPWKDNY LRLGEAAFSL DPLSSTGVEK AMRFSLQAVI
AINTILKTDQ TSMAQSFYEN KMIESIASHT HWTSGYYAQA WPGQGHPFWQ RRSLPYIDTP
GQSTPFYNRL KDKFNPAPPP GPQRRINVQQ ELPRLWHETV QLSPSLIFEE VPCVIDDMLQ
LRTAIRHPNL DREIAYVEEV ELSPLLSMAN KSATFGAIVE EWSKLLPFEQ AVRIAFFLWD
KDILCEMP