Gene Cpin_4490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4490 
Symbol 
ID8360663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5583544 
End bp5585064 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content47% 
IMG OID644966645 
Producthypothetical protein 
Protein accessionYP_003124133 
Protein GI256423480 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0688012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGTA ATTTTGAACG TTACCTCGGC CCTGTGTTCG AAAGGGCACA ACTCAACAAA 
GTCAGAACGG AAGCACTGAA ATCAGCTAAT TTCGATGGCA TCCAGTCCAT GGATTACTCC
ACCTTCGAAA CCAGTGAAGC CCCTATCAGT ATCCCACCGG AATTCAACGG CAAAGACTAT
GTTTCTTTCC TGCTTTGTAT CGATGCGGAA ATTGAACATG GCCTGATGCT GCAATATCTG
TACGCCGCTT ACAGTCTTGG CGGTCCGCAG ATACCTGACG AATACAAACA ACCGATCAAG
GAAGCACAAG AAGTGATCCT CGGCATTGCC AAGGAAGAAA TGGGCCACTT CGTTTCTGTA
CAGAATGTAC TCAAACTGAT CGGTGCTCCA CTGCATTTTG AAAGACAGGA TTATCCCTGG
GATACGCCCT TCTACCCTTT TCCTTTTAAG CTGGAACCGC TGACCCTTGG TTCACTGGCA
AAATATGTCT ACGCTGAAGC TCCGCAAAGC TGGCTGGATG AAGATCAGGA ATGGGCGCCG
GAGATCAAAA GATGGGTATT TGCAGAGGTA CCGAAGCCTA ATACCGTAGG CGCATTATTC
GAAGTATTAC TTAAACTGAT CAACGATCCG GATGTTATCC CTGATGAAGC TTTCCAGGCA
GAAACCTTTC CTTTCCAGGC CAAGTTCGAT GAATGGGGTC GTGGTTATAA AAAAGGTGAG
CGTGGCAATC CGGATGGAAG TGGTCCTGCC GGTTCTCCTG ATGTATTGGT AATGCCACTG
GCAAGCAGAG ATGACGCCTT TAAAGCACTC AGCGAGATCG CAGAACAGGG AGAAGCCACC
ATCGATGAAA ACCCGGCTCC ATCTCACTTT GAGCGCTTCC TCGATGTATA TAAAAAGCTT
AAAAAGGTCA TGAATGACTC AGCATCGACC TTCCCTCTTT CGAGGAACGT AGCGATCAAT
CCTGAAATCC CTGCCGACAG CGGTGATTAT CCAAGCGATG ATCCTAACAG TTCTCCTTCA
GAAGGACAGA TCTATGAACC CAACCCAAAA TATAACGAGC TGGATTTTAT CACCAATCCG
GAAGCACAGA CATGGGGACA CCTGTTCAAC TTACGTTACC GTATGCTGTT GAACTTCCTC
ACACACAGCT TCCTGCTGGA CAATGGTTTT AATAATGTAG GCGCTATCTC ACCACGTGGT
ATGATCATCA ATTCTACTTT TGGTGAAATG TACAACCTGC GCAGCATAGC CACTGTGATG
GTACAATTGC CACTCACGAC AGATACAAGT AATACCAAAG TTGCCGGTCC GCCGTTCCTG
GTACCCTACA CACTCACGCT TCCTATGGGA GAACATAACA GATGGCGTAC ACATAAGGAC
CTGATCGAGG CATCTCAACC CCTGATCGCT AAACTGCTGC ATCAATCAGC TGAGTACAAT
CATCGTTATC TCCATTCATT AAGAGAAGCT GACCTGCGGC TCTTACAGGT AATAGAGGAG
CTTACAACAA CCACTGTTTA A
 
Protein sequence
MQRNFERYLG PVFERAQLNK VRTEALKSAN FDGIQSMDYS TFETSEAPIS IPPEFNGKDY 
VSFLLCIDAE IEHGLMLQYL YAAYSLGGPQ IPDEYKQPIK EAQEVILGIA KEEMGHFVSV
QNVLKLIGAP LHFERQDYPW DTPFYPFPFK LEPLTLGSLA KYVYAEAPQS WLDEDQEWAP
EIKRWVFAEV PKPNTVGALF EVLLKLINDP DVIPDEAFQA ETFPFQAKFD EWGRGYKKGE
RGNPDGSGPA GSPDVLVMPL ASRDDAFKAL SEIAEQGEAT IDENPAPSHF ERFLDVYKKL
KKVMNDSAST FPLSRNVAIN PEIPADSGDY PSDDPNSSPS EGQIYEPNPK YNELDFITNP
EAQTWGHLFN LRYRMLLNFL THSFLLDNGF NNVGAISPRG MIINSTFGEM YNLRSIATVM
VQLPLTTDTS NTKVAGPPFL VPYTLTLPMG EHNRWRTHKD LIEASQPLIA KLLHQSAEYN
HRYLHSLREA DLRLLQVIEE LTTTTV