Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4490 |
Symbol | |
ID | 8360663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5583544 |
End bp | 5585064 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644966645 |
Product | hypothetical protein |
Protein accession | YP_003124133 |
Protein GI | 256423480 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0688012 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACGTA ATTTTGAACG TTACCTCGGC CCTGTGTTCG AAAGGGCACA ACTCAACAAA GTCAGAACGG AAGCACTGAA ATCAGCTAAT TTCGATGGCA TCCAGTCCAT GGATTACTCC ACCTTCGAAA CCAGTGAAGC CCCTATCAGT ATCCCACCGG AATTCAACGG CAAAGACTAT GTTTCTTTCC TGCTTTGTAT CGATGCGGAA ATTGAACATG GCCTGATGCT GCAATATCTG TACGCCGCTT ACAGTCTTGG CGGTCCGCAG ATACCTGACG AATACAAACA ACCGATCAAG GAAGCACAAG AAGTGATCCT CGGCATTGCC AAGGAAGAAA TGGGCCACTT CGTTTCTGTA CAGAATGTAC TCAAACTGAT CGGTGCTCCA CTGCATTTTG AAAGACAGGA TTATCCCTGG GATACGCCCT TCTACCCTTT TCCTTTTAAG CTGGAACCGC TGACCCTTGG TTCACTGGCA AAATATGTCT ACGCTGAAGC TCCGCAAAGC TGGCTGGATG AAGATCAGGA ATGGGCGCCG GAGATCAAAA GATGGGTATT TGCAGAGGTA CCGAAGCCTA ATACCGTAGG CGCATTATTC GAAGTATTAC TTAAACTGAT CAACGATCCG GATGTTATCC CTGATGAAGC TTTCCAGGCA GAAACCTTTC CTTTCCAGGC CAAGTTCGAT GAATGGGGTC GTGGTTATAA AAAAGGTGAG CGTGGCAATC CGGATGGAAG TGGTCCTGCC GGTTCTCCTG ATGTATTGGT AATGCCACTG GCAAGCAGAG ATGACGCCTT TAAAGCACTC AGCGAGATCG CAGAACAGGG AGAAGCCACC ATCGATGAAA ACCCGGCTCC ATCTCACTTT GAGCGCTTCC TCGATGTATA TAAAAAGCTT AAAAAGGTCA TGAATGACTC AGCATCGACC TTCCCTCTTT CGAGGAACGT AGCGATCAAT CCTGAAATCC CTGCCGACAG CGGTGATTAT CCAAGCGATG ATCCTAACAG TTCTCCTTCA GAAGGACAGA TCTATGAACC CAACCCAAAA TATAACGAGC TGGATTTTAT CACCAATCCG GAAGCACAGA CATGGGGACA CCTGTTCAAC TTACGTTACC GTATGCTGTT GAACTTCCTC ACACACAGCT TCCTGCTGGA CAATGGTTTT AATAATGTAG GCGCTATCTC ACCACGTGGT ATGATCATCA ATTCTACTTT TGGTGAAATG TACAACCTGC GCAGCATAGC CACTGTGATG GTACAATTGC CACTCACGAC AGATACAAGT AATACCAAAG TTGCCGGTCC GCCGTTCCTG GTACCCTACA CACTCACGCT TCCTATGGGA GAACATAACA GATGGCGTAC ACATAAGGAC CTGATCGAGG CATCTCAACC CCTGATCGCT AAACTGCTGC ATCAATCAGC TGAGTACAAT CATCGTTATC TCCATTCATT AAGAGAAGCT GACCTGCGGC TCTTACAGGT AATAGAGGAG CTTACAACAA CCACTGTTTA A
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Protein sequence | MQRNFERYLG PVFERAQLNK VRTEALKSAN FDGIQSMDYS TFETSEAPIS IPPEFNGKDY VSFLLCIDAE IEHGLMLQYL YAAYSLGGPQ IPDEYKQPIK EAQEVILGIA KEEMGHFVSV QNVLKLIGAP LHFERQDYPW DTPFYPFPFK LEPLTLGSLA KYVYAEAPQS WLDEDQEWAP EIKRWVFAEV PKPNTVGALF EVLLKLINDP DVIPDEAFQA ETFPFQAKFD EWGRGYKKGE RGNPDGSGPA GSPDVLVMPL ASRDDAFKAL SEIAEQGEAT IDENPAPSHF ERFLDVYKKL KKVMNDSAST FPLSRNVAIN PEIPADSGDY PSDDPNSSPS EGQIYEPNPK YNELDFITNP EAQTWGHLFN LRYRMLLNFL THSFLLDNGF NNVGAISPRG MIINSTFGEM YNLRSIATVM VQLPLTTDTS NTKVAGPPFL VPYTLTLPMG EHNRWRTHKD LIEASQPLIA KLLHQSAEYN HRYLHSLREA DLRLLQVIEE LTTTTV
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