Gene Cpin_4486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4486 
Symbol 
ID8360659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5577005 
End bp5577529 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content47% 
IMG OID644966641 
ProductPhosphoglycerate mutase 
Protein accessionYP_003124129 
Protein GI256423476 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0491254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTAC ATCTGATCAG ACATATCAAA CCCGACTATC CTGAAGGCCA TACCTACGGA 
CAGACAGACG TACCGCTACC GGCAGACTAT GCCATCACAC ATGCCGGCAT CATCGAACGC
CTGCCGGATC ATGAAGTGTT GTATAGTAGT CCGCTGACCA GGTGTAAATT GCTGGCGACC
GCCATTAACC CAAACCATCT GACAGATGCA CGTTTGATGG AACTGAACTT CGGCGACTGG
GAGGGCAGAA AATGGGATGA GATCGATCGT AAGGAACTCG ATCCCTGGAT GGAGGATTAT
AACTATATCA ACTCAGCGCC ACCTAACGGA GAATCGCTGA TGACCTTAGT GAATCGCTTT
GCTGATTTTG TACATGAACT GAAGCAGATG CCTTACGAAC GCGCATTATT AATCACACAT
GCAGGTGTTA TCCGTTCGGC GATGTATTTG TTTAATAATG TTCCCTTGCA GGAGATGATG
ATGCAGAAAG TTGAATACGG CGGCATTTAT CGCTTCACTG CGTGA
 
Protein sequence
MELHLIRHIK PDYPEGHTYG QTDVPLPADY AITHAGIIER LPDHEVLYSS PLTRCKLLAT 
AINPNHLTDA RLMELNFGDW EGRKWDEIDR KELDPWMEDY NYINSAPPNG ESLMTLVNRF
ADFVHELKQM PYERALLITH AGVIRSAMYL FNNVPLQEMM MQKVEYGGIY RFTA