Gene Cpin_4482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4482 
Symbol 
ID8360655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5573865 
End bp5574545 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content45% 
IMG OID644966637 
Productvon Willebrand factor type A 
Protein accessionYP_003124125 
Protein GI256423472 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1240] Mg-chelatase subunit ChlD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0851015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGCTGA AGGCCAGTCC TGTGAGTACC CGAAAGGGCG CCACAATCAA AAAGGATAAC 
AGCAAAACAG GCTTTACACA AAGACCTGCT TACGCTCGTT CAACGCCGAA AGTCGCCATA
TTAAAGACGC TGAAGCATTA TCTGGCACAT GATAAAGTAG AGATTCAGTA TAAGCAGGAA
CAGGCCAAAA ACGAATTATA TGTTTGTTTC CTGTTAGATT CCAGCGGGTC TATGATGAAA
GACAAGCAAA TTGCTTTTAT CAAGGGTCTG GTAGCAACAA CGATTGCCAG GTATAAGACC
CGGCGTATAA AATATGCAGC AGTCGCCCTG CACAATGGTA CGGCGCAAAT ATTATCTGCT
CCTACCCTAC ATGCAGATGA ACTACTTCAG ACAATTGCGG CACTGAAAAC CGGCGGTAAA
ACGAACATGC AATCCGGGTT TGTTTTGCTG CATCAGCTGA TGAAAACGAA TACACAGCAG
AAAGCCAGTC TGTACATCTT TACGGATGGT AAGATCAATG CAGGCAATAC AGCCACTCCT
TTTGAAGAAG CCGTCAGGTA TTATAAACAG TACCTTTCTG CTATCAGGGA GACGACTGTA
GTGGATAATG AGAGCGGTTT TGTGCAATTG GGGAAGGCAG GAGAATTGGC GGAAGCGATC
AAGGCGAAGC TGGTGAAATA A
 
Protein sequence
MQLKASPVST RKGATIKKDN SKTGFTQRPA YARSTPKVAI LKTLKHYLAH DKVEIQYKQE 
QAKNELYVCF LLDSSGSMMK DKQIAFIKGL VATTIARYKT RRIKYAAVAL HNGTAQILSA
PTLHADELLQ TIAALKTGGK TNMQSGFVLL HQLMKTNTQQ KASLYIFTDG KINAGNTATP
FEEAVRYYKQ YLSAIRETTV VDNESGFVQL GKAGELAEAI KAKLVK