Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4482 |
Symbol | |
ID | 8360655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5573865 |
End bp | 5574545 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644966637 |
Product | von Willebrand factor type A |
Protein accession | YP_003124125 |
Protein GI | 256423472 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1240] Mg-chelatase subunit ChlD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0851015 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGCTGA AGGCCAGTCC TGTGAGTACC CGAAAGGGCG CCACAATCAA AAAGGATAAC AGCAAAACAG GCTTTACACA AAGACCTGCT TACGCTCGTT CAACGCCGAA AGTCGCCATA TTAAAGACGC TGAAGCATTA TCTGGCACAT GATAAAGTAG AGATTCAGTA TAAGCAGGAA CAGGCCAAAA ACGAATTATA TGTTTGTTTC CTGTTAGATT CCAGCGGGTC TATGATGAAA GACAAGCAAA TTGCTTTTAT CAAGGGTCTG GTAGCAACAA CGATTGCCAG GTATAAGACC CGGCGTATAA AATATGCAGC AGTCGCCCTG CACAATGGTA CGGCGCAAAT ATTATCTGCT CCTACCCTAC ATGCAGATGA ACTACTTCAG ACAATTGCGG CACTGAAAAC CGGCGGTAAA ACGAACATGC AATCCGGGTT TGTTTTGCTG CATCAGCTGA TGAAAACGAA TACACAGCAG AAAGCCAGTC TGTACATCTT TACGGATGGT AAGATCAATG CAGGCAATAC AGCCACTCCT TTTGAAGAAG CCGTCAGGTA TTATAAACAG TACCTTTCTG CTATCAGGGA GACGACTGTA GTGGATAATG AGAGCGGTTT TGTGCAATTG GGGAAGGCAG GAGAATTGGC GGAAGCGATC AAGGCGAAGC TGGTGAAATA A
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Protein sequence | MQLKASPVST RKGATIKKDN SKTGFTQRPA YARSTPKVAI LKTLKHYLAH DKVEIQYKQE QAKNELYVCF LLDSSGSMMK DKQIAFIKGL VATTIARYKT RRIKYAAVAL HNGTAQILSA PTLHADELLQ TIAALKTGGK TNMQSGFVLL HQLMKTNTQQ KASLYIFTDG KINAGNTATP FEEAVRYYKQ YLSAIRETTV VDNESGFVQL GKAGELAEAI KAKLVK
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