Gene Cpin_4476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4476 
Symbol 
ID8360649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand+ 
Start bp5567294 
End bp5568481 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content47% 
IMG OID644966631 
Productprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 
Protein accessionYP_003124119 
Protein GI256423466 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2241] Precorrin-6B methylase 1
[COG2242] Precorrin-6B methylase 2 
TIGRFAM ID[TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
[TIGR02469] precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0452246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0430565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAATATA TCGTTATCGG CATATCAAAC AATCCTGACT ATCTCCTGCC GGAAGCGGCC 
ATAGATATAG TCCCACACTA CCGCGTGTTC TCCGGTGGAA AAAGACACTA TGAACTGATA 
CAAAAACATC TGCCTGCCGG TCACCAGTGG ATAGATATCC GGAGTGATAT GCAGGCGTTG 
TTTGAACAAT ATAAAACGTA TGACGAGGAT ATCGTGGTTT TCGCTTCAGG AGATCCGCTA 
TTCTACGGAT TCGCAGCAAC CATACAAAAA TATCATCCGG AAGCAGACCT GCAGGTATCG 
CCTTATTTCA ACAGCATACA GCTGCTTTGT CACCGGTTGA ACTTTGTCTA TTCTCATATA 
GTGAATACTT CTGTACACGG CCGTTCCTGG GAAGAACTGG ACCAGGCCCT GCTCAGACAA 
CACCAGAGCA TCGGTATTCT CACTGATCAG GTGAAAACAC CGGCTGCCAT TGCAGCACGT 
ATGGTGGAAT ATGGGTACGA TAACTACGTG ATGTATATCG GCGAAAACCT GGAAGGACCC 
GGACAAAAGA TCGTATTCGG CGAGCATATG AAAGACATGC GGGACTATGA AGCACATACA 
CTCAACTGTG TGCTGCTGAA TAAAAAGCAG CAAAGGTCTT TATCAGCCGG CATACCCGAT 
CATAGTTTTG AAGGACTGGA AGGCCGGCCG AATATGATCA CCAAAATGCC TGTAAGGATG 
GTTAGTCTGG CACAGCTGGA TTTATCTGCA AGGCATACCC TCTGGGATAT CGGGTTCTGT 
ACAGGATCCG TATCCATAGA AGCCCGCAGG CAATATCCGC ATTTGCAGAT TGTAGCTTTT 
GAGAAGCGTC CGGAATGTGA TACTCTGTTT GAGGTCAATA CCCGCAAACA TGCCACACCG 
GGGATCCGGA AAGTGATGGG TGATTTCTTC GAACAGGACC TCGCCTCCTT ACCCAAACCC 
GATGCTGTTT TTATTGGTGG ACATGGCAAC CGCCTGGAAG CATTGATCAG CCAACTGGAC 
AACTATCTGC CATCAAAAGC GAAACTCGTT ATCAATGCGG TCAAAGAAGA CAGCAAGACG 
CAGTTTATCG CGGCAGCCAG AGGATTAAAC TATACATTAT CTGAACCGAT GGTGATCACT 
GTGGATGCCC ACAATCCGAT TACTATCCTG ACAGCAGAAA AGCAATAA
 
Protein sequence
MEYIVIGISN NPDYLLPEAA IDIVPHYRVF SGGKRHYELI QKHLPAGHQW IDIRSDMQAL 
FEQYKTYDED IVVFASGDPL FYGFAATIQK YHPEADLQVS PYFNSIQLLC HRLNFVYSHI 
VNTSVHGRSW EELDQALLRQ HQSIGILTDQ VKTPAAIAAR MVEYGYDNYV MYIGENLEGP 
GQKIVFGEHM KDMRDYEAHT LNCVLLNKKQ QRSLSAGIPD HSFEGLEGRP NMITKMPVRM 
VSLAQLDLSA RHTLWDIGFC TGSVSIEARR QYPHLQIVAF EKRPECDTLF EVNTRKHATP 
GIRKVMGDFF EQDLASLPKP DAVFIGGHGN RLEALISQLD NYLPSKAKLV INAVKEDSKT 
QFIAAARGLN YTLSEPMVIT VDAHNPITIL TAEKQ