Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4469 |
Symbol | |
ID | 8360642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5560898 |
End bp | 5561851 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644966624 |
Product | cobalamin biosynthesis protein CobD |
Protein accession | YP_003124112 |
Protein GI | 256423459 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.277077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0655318 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCAGC AGTATCTCTT AATCATTATT CCCTTAGTGG CGGGCTATCT GCTGGACCTG GCATTGGGAG ATCCACGCTG GCTGCCACAC CCGATAAGGT TGTTTGGTCA TCTGATCAGC TTTGGTACCA AAACACTCAA CCGGGGGAAA GGCCGTTTCC TGAAGGGGAT GATTTTGAGC GTCTTACTGT GTGCTATCTG CTGGCTATTC TTTGCCGGCA TGCAGTTTTG GTTACTGCGA ATACAGACAC CCGCCTTTTA CTACCTGTTC ACCTCCATTT TCGTCTTCTT TGCTTTAGCC AATAAAAGCC TCTTACAGGA AGGCCGCGAG GTTTTTGACG CACTGAGTAG TCAGGGACTG GATGCGGGCA GAAAACGCCT TTCCTGGATC GTAGGGAGGG AAACCAAAAA CCTCGGCGAA AACCAGATCA GAACTGCCGT CTTTGAAACC CTCTCAGAAA ACCTGAGCGA CGGAGTCATT GCGCCCCTTT TCTATTACGC CGTTGGCGGA TTACCGGCTA TGATGACCTA TAAGATGATT AACACCCTGG ATTCCATGAT CGGGTATAAA AAAGAGGAAT ATTTCTGGTT CGGGAAATTT GCCGCCAGAC TGGACGATGT GGCCAACTTC ATTCCGGCGC GTATCACAGC ACTGCTCATG GTACTGGTAG CCTTCAGCAG ACGGGGACTG ACCTACATCT TCAGATATGG CCACCAGCAC GCCAGTCCGA ATTCAGGATA CCCGGAAGCC GCCCTGGCAG GTATTATGTA CTGCCGCTTT GGAGGGCCAA ATACCTACCA TGGACAATTA GTAGTCAAAC CCTATATTGG TGAACACCCC CGGGATATTG CCCACGAAGA ACTGCGCAAA GTCATGTATA TCAATCATGC TGTCACATTC CTGAGCGTTT TACTCATAGT CGCCACCTAT ATAATATACG CCGTAACTAC CTGA
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Protein sequence | MDQQYLLIII PLVAGYLLDL ALGDPRWLPH PIRLFGHLIS FGTKTLNRGK GRFLKGMILS VLLCAICWLF FAGMQFWLLR IQTPAFYYLF TSIFVFFALA NKSLLQEGRE VFDALSSQGL DAGRKRLSWI VGRETKNLGE NQIRTAVFET LSENLSDGVI APLFYYAVGG LPAMMTYKMI NTLDSMIGYK KEEYFWFGKF AARLDDVANF IPARITALLM VLVAFSRRGL TYIFRYGHQH ASPNSGYPEA ALAGIMYCRF GGPNTYHGQL VVKPYIGEHP RDIAHEELRK VMYINHAVTF LSVLLIVATY IIYAVTT
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