| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4466 |
|---|
| Symbol | |
|---|
| ID | 8360639 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 5557094 |
|---|
| End bp | 5558386 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644966621 |
|---|
| Product | cobyrinic acid a,c-diamide synthase |
|---|
| Protein accession | YP_003124109 |
|---|
| Protein GI | 256423456 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1797] Cobyrinic acid a,c-diamide synthase |
|---|
| TIGRFAM ID | [TIGR00379] cobyrinic acid a,c-diamide synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.360132 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0764127 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCTC AGTTTTTAAT TGCAGCACCC AGTAGTAATT CCGGGAAAAC AACCATTACG
CTGGGCTTAC TACGTCTCTT ACACAAGCGG GGAATGAGCG TACAGCCGTT TAAGTGCGGT
CCTGATTACA TTGACACAAA ACATCATTCC TTCGCCGCAC ATAAAACCAG TGTGAACCTT
GATACCTTCA TGATGAGCGA AGCGCATCTG AAAGAAGTGT ATGGGAAATA TGCAGGTGAT
GCAGATGTGG TCATTACCGA AGGTGTTATG GGACTTTTTG ACGGTGCGGA CCGTATGAAA
GGAAGTAGTG CGGAGATTGC TATGGTGCTG GAGCTGCCGG TGATATTAGT GGTCAATGCC
AAAGCAATGG CTTATTCCGT AGCGCCGCTG ATCTATGGGT TTATGCATTT TCATCCAGGC
GTGAAGATAG CAGGGGTGAT TTTCAACTTT GTCAATACAG AGAGTCATTA CCAGTTCCTG
AAAGATGGTT GTGCCGATTT AGGTATTGCC CCGCTGGGAT ATGTACCAGC AAATGAACAT
ATTAAAATAC CGTCCCGGCA TCTGGGGCTG GCGATATCTC CGGAGAATGA CTATGAAAGT
ATTATAGAGG CGGCCGCAGC ACATATCAGT CGTACTGTTG ACGTGGATCT GATACTGGAG
ATGACACAGA GACCTGATCC TGTTCATACA CCGTTTATTC GTGTAGAGAA AGGAGGCTTG
CCGATTGCAG TAGCCAGCGA CGAAGCGTTT AACTTTACAT ATCTGGAGAA TCTGGATGCC
TTGCGTAATG CAGGAGAGGT CAGCTTCTTC AGTCCTTTAC ATGACCCTGT GATGCCGGCA
GCTGAGATAT TGTATCTGGC AGGTGGTTAT CCGGAATTGT ATTTGGAGCA GTTATCGGCT
AATATGACTA TGCGTGAGTC CGTGCGGGCG TTTTGTGAAA ATGGAGGAAA GGTGATCGCA
GAATGTGGCG GGATGATGTA CCTCGGAGAG AGCATCGGAG ATAAGGAAGG TCTGGAGTAT
CCGATGGTAG GTTTTTTAGG ATTGAAGACG ACGATGCAGG GAGCGAAGTT GTCATTAGGG
TATAGGATAG TGGAGATCGG AGAGAAACGG TTTAAAGGGC ATGAGTTTCA TTATTCTGTT
AGTGCGGAGA CGGAGGCATT GGAGCGGATA GGGAAGGTGT ATAATGCGCG GGGGAAGGAG
GTGGATATGG CGGTGTATAG GAAAGGGAAT GTAGTGGCAT CGTATATGCA TGTGTATTGG
GGGGAGAATG GGGAGTGGTT GAGGGCGGAG TGA
|
|---|
| Protein sequence | MKPQFLIAAP SSNSGKTTIT LGLLRLLHKR GMSVQPFKCG PDYIDTKHHS FAAHKTSVNL
DTFMMSEAHL KEVYGKYAGD ADVVITEGVM GLFDGADRMK GSSAEIAMVL ELPVILVVNA
KAMAYSVAPL IYGFMHFHPG VKIAGVIFNF VNTESHYQFL KDGCADLGIA PLGYVPANEH
IKIPSRHLGL AISPENDYES IIEAAAAHIS RTVDVDLILE MTQRPDPVHT PFIRVEKGGL
PIAVASDEAF NFTYLENLDA LRNAGEVSFF SPLHDPVMPA AEILYLAGGY PELYLEQLSA
NMTMRESVRA FCENGGKVIA ECGGMMYLGE SIGDKEGLEY PMVGFLGLKT TMQGAKLSLG
YRIVEIGEKR FKGHEFHYSV SAETEALERI GKVYNARGKE VDMAVYRKGN VVASYMHVYW
GENGEWLRAE
|
|---|
| |