| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4463 |
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| Symbol | |
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| ID | 8360636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5554733 |
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| End bp | 5555758 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644966618 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003124106 |
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| Protein GI | 256423453 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.29527 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.178629 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAACA GCACAAACAA CTACAACGGC GCCTTACAAC ACCCGATCGG CTCGGGTTTC
GACGCCGCGT CAACAGCAAC GGACGTTATC AAAGGCATTT CTCTCCAGGG TAAAACAGCA
ATCATTACCG GCGGTTACTC AGGCATTGGT CTGGAGGCGG CAAAAACACT GGCCAATGCA
GGCGTGGAGG TCTATATCCC TGCAAGAACA ATCGAAAAAG CAGCTGGCAA TCTCGCAGGT
ATCCCCAATG TCACCATACT GGAAATGGAC CTGATGGATC CTGCTTCCAT CGACGCTTTC
GCAGAAAAAT TCCTGGCACT GAACAAACCA CTGGACATCC TGATCAACAA CGCAGGTGTG
ATGTGGACGC CGTTAAGACG TGACGCCCGT GGGTATGAGT CACAGTTCTC TACCAATCAC
CTTGGACATT TCCAGCTGAC CGCACGTCTC TGGCCGGCTA TCAAAAGTGC GCAGGGGGCA
AGGATTGTAA ACGTTTCTTC CTGGGGACAT CACATGGCGT CAATAGATCT GAATGATCCT
AATTTCGACC ATCAGGCATA TGACCCTTCC GTTTCTTATG CGCGGGCGAA ACAGGCCAAT
GTCCTGTTTA CCGTCGAACT GGACAAACGG GCACAGGCAC ACGGTGTAAG ATCCTTTTCA
CTGCATCCCG GGGCTATTGC CGTGACAGAT CTTGGCAGGG ATATCCCGGA AGAAGGCTTC
AGGGCTTTAG GCGTATATGA GGAAGATGGC AGTTTCCGCC ACGATCCTTA CAATGGCTAT
AAAACATTAG AAGAAGGTGC TTCCACAACA GTCTGGTGCG CTACAAGCCC TAAATTGGCC
AATATAGGGG GTGTTTATTG TGAGGATACG GAAGTGGCTG CAATCGACCA GGACTGGCAA
GGCTTTAAAT CAGACAAGTT TGAAATGACC AAAGGGGTGA CTGCCGAGGC GGTTAATGGC
GAAAAAGCCC AACAACTCTG GACACTCAGC GAAAAATTAA CTGGTATCAC GTTTGCCGTA
TCCTGA
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| Protein sequence | MANSTNNYNG ALQHPIGSGF DAASTATDVI KGISLQGKTA IITGGYSGIG LEAAKTLANA
GVEVYIPART IEKAAGNLAG IPNVTILEMD LMDPASIDAF AEKFLALNKP LDILINNAGV
MWTPLRRDAR GYESQFSTNH LGHFQLTARL WPAIKSAQGA RIVNVSSWGH HMASIDLNDP
NFDHQAYDPS VSYARAKQAN VLFTVELDKR AQAHGVRSFS LHPGAIAVTD LGRDIPEEGF
RALGVYEEDG SFRHDPYNGY KTLEEGASTT VWCATSPKLA NIGGVYCEDT EVAAIDQDWQ
GFKSDKFEMT KGVTAEAVNG EKAQQLWTLS EKLTGITFAV S
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