| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4461 |
|---|
| Symbol | |
|---|
| ID | 8360634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 5552924 |
|---|
| End bp | 5553850 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644966616 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003124104 |
|---|
| Protein GI | 256423451 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.11609 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC TATTGACGAT TATTATATGT CTGCTGATAG CAAGTTATGA AACGAGGGCC
TGTGATATCT GCGGTTGTGG CCTAGGCAGT TATTATATTG GTCTGCTGCC TGATTTCAAA
AAGCGGTTTC TGGGTATACG CTATCAATAT AAAACCTTAC GCTCGCACCT GGGCCCCGGA
GGTACAACTT CCTATCTCAC GACAGACGAA ACCTATCAGA CGGCGGAGAT ATGGGGCGGA
TGGAATATAG GGAAGCGTTT CAGGGTACTG GGATTTGTTC CTTTGAATTT TAACAGTCGG
GAGAACCAGG GTGTTACGAT GAATAAATCC GGCATCGGAG ATATTGCTGT TGTGGGATAC
TACCAGGTGC TTGACAGGAA AACGCTCCTA TTCCATGATC GGCTGCTGGT ACAATCACTC
TGGATTGGTG GTGGTATTAA AGCGCCTACC GGCAGATATG AGCCTTCCGA ACGAAAGGAG
AATGAGGATA CGCCGAATAA CTTTCAACTG GGTACGGCGA GTACGGACTT TACTTTCAAT
GCTATGTATG ATGTACGCCT GATGGATTTT GGAGTGAATG CGAATGTGAG TTATAAGGTG
AATACGAATA ACAGGTATGA TTACAGGTAT GGGAATAAGT TCACTGCGAA TCTGCTGGCA
TATTATAAAT TCCGCATAGC GGATCAGTTG ACGGTAGCGC CTAATGCCGG GATGCTATTA
GAGACAGCCA CGAAAGACAC GGAAGCAGAC AGATACAAAG TGGATGTTTC AGGCGGACAT
TCATTATTGG CCACAGGAGG TATTGAAGCA ACATTCAGGA CCTTTTCTGT TGGGGCCAAC
TATCAACCTG TCATCTCACA AGACCTGGCC GATATGCGGG TGAAAGCAGG CAACAGGGCG
ATGGTGCATG TCAGCTATCT GTTCTAA
|
|---|
| Protein sequence | MKKLLTIIIC LLIASYETRA CDICGCGLGS YYIGLLPDFK KRFLGIRYQY KTLRSHLGPG
GTTSYLTTDE TYQTAEIWGG WNIGKRFRVL GFVPLNFNSR ENQGVTMNKS GIGDIAVVGY
YQVLDRKTLL FHDRLLVQSL WIGGGIKAPT GRYEPSERKE NEDTPNNFQL GTASTDFTFN
AMYDVRLMDF GVNANVSYKV NTNNRYDYRY GNKFTANLLA YYKFRIADQL TVAPNAGMLL
ETATKDTEAD RYKVDVSGGH SLLATGGIEA TFRTFSVGAN YQPVISQDLA DMRVKAGNRA
MVHVSYLF
|
|---|
| |