| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4456 |
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| Symbol | |
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| ID | 8360629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5549143 |
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| End bp | 5549928 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644966613 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003124101 |
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| Protein GI | 256423448 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0480733 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTTA CCGAAATAAA ATCCTGTTTT ATCGGACCGG CCATTTCTCC GGAACAATTT
ATCAGTGAGC ATACCTTTAT TTATATCGGG AAGGGTGCGA TCACCGGTTT TGATGGGAAT
GCACAGCATA CCCTTAAAAC AGGGGAATAC TGTGTCCTGC GGAAGAATTG TCTGGTCCGG
TATAACAAGG AAAAGGAGAA TAACGAGTTT GAAAAGGTAG TCATTGTTTT CGACGAAGAC
TTCCTGAAAC GATTCCTGGA CAAATATAAA CCAAACCAGG AGGCGCCTGT ATCAGCCGAT
GTGTTGGTGA AACTGAGGGA GAATAGACTG ATCCCTAATT TTGTGCACTC CTTAATTCCT
TATTACGACG GACAGGGAAG AATCATGGAG ACTTTTGTAG ATGTGAAGCG GGAAGAATTA
ATGCTGATCC TTTTACAATC ACAACCTGAA CTGGCGGGCA TTTTCTTTGA TTTCGGTGTA
CCGGAGAAGA TTAACCTGGA AGAGTTCATG AACCATAATT ACCGGTTCAA TGTCAGCATC
GAACGTTTTG CTTATCTCAC GGGAAGAAGT CTGTCGGCTT TTAAACGGGA CTTCAGGGCC
ATCTTCCATG AAACACCTAA CCGCTGGCTG GTATACAAAC GACTACAGGA AGCACATTTC
CTGATTGCGA AAAAACAGCA GAAATCATCG GACATTTACC TGGATCTGGG ATTTGAGGAT
TTATCACACT TCTCTTTTGC ATTCAAGAAG CAGTTTGGGT ATGCGCCGAC GGAACTGGTG
AGGTAG
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| Protein sequence | MRFTEIKSCF IGPAISPEQF ISEHTFIYIG KGAITGFDGN AQHTLKTGEY CVLRKNCLVR
YNKEKENNEF EKVVIVFDED FLKRFLDKYK PNQEAPVSAD VLVKLRENRL IPNFVHSLIP
YYDGQGRIME TFVDVKREEL MLILLQSQPE LAGIFFDFGV PEKINLEEFM NHNYRFNVSI
ERFAYLTGRS LSAFKRDFRA IFHETPNRWL VYKRLQEAHF LIAKKQQKSS DIYLDLGFED
LSHFSFAFKK QFGYAPTELV R
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