Gene Cpin_4452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4452 
Symbol 
ID8360625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5544535 
End bp5546073 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content48% 
IMG OID644966609 
Productsulphate transporter 
Protein accessionYP_003124097 
Protein GI256423444 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0659] Sulfate permease and related transporters (MFS superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.248248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0871975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGCTT ACCTTAATTT ATTTGACTTT AAACAAAAGG TCAATTACAA GACTGAAGTA 
TTGGCCGGGC TGACCGTGGC CATGACCATG ATCCCTGAGT CGCTATCTTT TGCCATTCTG
GCGGGATTGT CACCGCTCAC CGGTTTATAT GCCGCTTTTC TGATGGGACT GATCACAGCC
GTTTTCGGCG GCAGACCTGG CATGGTATCG GGAGGGGCGG GCGCTACCGT AGTCGTATTG
ATAGCCCTGA TGCAGTCACA TGGGGTAGAA TACGTATTCG CAGCAGTCGC TTTAGCCGGC
CTTTTCCAGC TCAGTGTAGG TATCTTCAGA TTAGGGAAGT TTATCCGACT GGTACCACAA
CCAGTGATGT ACGGATTTGT AAATGGCCTG GCCGTAATCA TTTTTATGGC CCAGATCCAG
CAATTCAGGA TCAATACCGG TAACGGCATG GAATGGTTGT CGGGTCCTGC CTTATGGACC
ATGTTGGGAC TGGTAGCAGT AACCATCGTC ATTGTACTGC TATTCCCGAA ACTGACCAAA
GCCGTACCAG CCTCACTGGT CGCCATCATC GTGGTCTTCT TGCTGGTACT GGGACTTGGT
ATCGAAACAA AGACCGTTAA AGACATTGCT TCCATCAGCG GTGGTTTCCC GCCATTTCAT
ATCCCCGTAG TACCTTTCAG TTTTGATACA CTTAAGGTCA TTTTCCCTTA TTCACTGGTT
ATGGCGGGTG TGGGATTGAT TGAAAGTCTG CTGACTTTAA ACGTGGTAGA TGAAATCACT
GGTACCAAGG GAAGAGGTAA TAAAGAAGCT GTCGCCCAGG GTACGGCCAA TATCGTAAAT
GGCTTTTTCA CCGGTATGGG CGGATGCGCC ATGATCGCAC AGTCTTTTGT AAACCTCTCA
GCAGGTTCCA GGGCCAGACT CTCTGGTATC ATCGCAGCAT TGACTATTCT GTTGATCATT
CTCTTCGGTG CGCCTGTCAT TGAAAGAGTA CCTATGGCTG CGCTGGTAGG TGTGATGATC
ATGGTGGCTA TCGGGACATT TGAATGGATC AGTTTGCGGA TCATCAATAA GATGCCTCGT
CACGACGTAG CGGTAGGTAT CCTGGTGGCA TTGATCACCG TATGGTTGCA CAACCTAGCA
TTAGCGGTAT TAATAGGTGT GATTATTTCC GCACTCGTTT TTGCCTGGGA AAGCGCCAAA
CGGATCCGCG CCAGGAAATA CACAGATGAA CAGGGGATCA GACATTATGA GATCTACGGT
CCTTTGTTTT TTGGATCGGT TTCCGTCTTC CTGGATAAGT TTGATGTGCA AAATGATCCG
TCGGAAGTGA TCGTTGATTT TAAGGAAAGT CGTGTAGCCG ATATGAGTGC TATCGATGCA
TTGAATAAAC TGACGGAGCG ATATCAGAAA GTTAACAAAA AACTACACCT GCGTCATCTG
AGTGAAGATT GCCGTCTGCT CTTGCAGAAT GCGGAAGGGG TGATAGAGGT GAATGTATTG
GAAGATCCTG ATTACAGGGT GGCAGCAGAA CCAAAATAG
 
Protein sequence
MKAYLNLFDF KQKVNYKTEV LAGLTVAMTM IPESLSFAIL AGLSPLTGLY AAFLMGLITA 
VFGGRPGMVS GGAGATVVVL IALMQSHGVE YVFAAVALAG LFQLSVGIFR LGKFIRLVPQ
PVMYGFVNGL AVIIFMAQIQ QFRINTGNGM EWLSGPALWT MLGLVAVTIV IVLLFPKLTK
AVPASLVAII VVFLLVLGLG IETKTVKDIA SISGGFPPFH IPVVPFSFDT LKVIFPYSLV
MAGVGLIESL LTLNVVDEIT GTKGRGNKEA VAQGTANIVN GFFTGMGGCA MIAQSFVNLS
AGSRARLSGI IAALTILLII LFGAPVIERV PMAALVGVMI MVAIGTFEWI SLRIINKMPR
HDVAVGILVA LITVWLHNLA LAVLIGVIIS ALVFAWESAK RIRARKYTDE QGIRHYEIYG
PLFFGSVSVF LDKFDVQNDP SEVIVDFKES RVADMSAIDA LNKLTERYQK VNKKLHLRHL
SEDCRLLLQN AEGVIEVNVL EDPDYRVAAE PK