Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4446 |
Symbol | |
ID | 8360619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5539109 |
End bp | 5540275 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644966603 |
Product | protein of unknown function DUF323 |
Protein accession | YP_003124091 |
Protein GI | 256423438 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03440] conserved hypothetical protein TIGR03440 |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0334841 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.294946 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATTT TAAACATGAA AGAACTGCTT ATTCAATACA ATGCTATAAG ACAACATACC GAAAATATAT GTATGCCCCT AGCAAGAGAA GATTATGTCG TACAACCGGT GATGGATGTT AGTCCGCCGA AATGGCACCT CGGACACAGT ACCTGGTTCT TCGAAACTTT CGTACTAAAG CCTCACTTTA CGGCCTACAC GGAGTTCGAT TCGCAGTATA ATTTTGTTTT TAATAGTTAT TACGAAACCA TCGGAGCAAG GGTGATCAGA ACAGATCGGG GCAACCTGAG CCGACCGTCC GTAGATGATA TTTATAGTTA TCGTCAGCAC GTAAATGATG CCATGCGAAC ATTGCTTGCC GGACCATTGA CGAAAGAACT TACCGGGATC ATCACTTTAG GATTGCATCA TGAACAACAG CACCAGGAAT TATTATATAC TGATATTAAA TACATCCTAG GGCATAATCC ATTATTCCCG GCATACAGTA CTACATCTGT TTATCAAGAA CCGGTAGTAG TAAATACCCG TTTCCTGACT ATTCCCGCAG GGATATATGA GATCGGTCAT CAGGGGAAGG ACTTCTGTTT TGACAATGAG CAGGGCAGGC ACAAGGTATA TCTGGGTGAA TATAAGATAG CTGATCAGTT GGTAACCAAT GGCGAATACC TGGCTTTTGT AAAGGCAGGG GCTTACCAGG ATTTCAGGTA TTGGCATGCG GAAGGCTGGG ATTGGGTGAA AAAGAATGAT ATCTCTGGCC CTTTATACTG GCACCTGGTG GGTGGCAGGC GAATGTGTTA CACCTATGCC GGTTTACAGG AATTGGACCT GTCTGCTCCG GTATGTCATA TCAGTTATTA CGAAGCAGCC GCGTATGCTG CCTGGAAAGG ACTGCGTTTG CCAACAGAAG CCGAATGGGA AATCGCGTCA CAACAATTTA AATGGGGTGC GAGATGGGAG TGGACGAACA GCGCTTACCT GCCTTACCCG GGATTTACTA AAGCGCCGGG AGCCGTGGGA GAGTATAATG GTAAGTTTAT GGTGAACCAG ATGGTATTAC GGGGTGCATC TGTGATGACG CCGGAGGGAC ATAGTCGTCA TACATACCGG AATTTCTTTC ACCCGCAGCA TCAATGGCAA TTTACAGGCA TCCGCCTGGC AGAATAG
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Protein sequence | MLILNMKELL IQYNAIRQHT ENICMPLARE DYVVQPVMDV SPPKWHLGHS TWFFETFVLK PHFTAYTEFD SQYNFVFNSY YETIGARVIR TDRGNLSRPS VDDIYSYRQH VNDAMRTLLA GPLTKELTGI ITLGLHHEQQ HQELLYTDIK YILGHNPLFP AYSTTSVYQE PVVVNTRFLT IPAGIYEIGH QGKDFCFDNE QGRHKVYLGE YKIADQLVTN GEYLAFVKAG AYQDFRYWHA EGWDWVKKND ISGPLYWHLV GGRRMCYTYA GLQELDLSAP VCHISYYEAA AYAAWKGLRL PTEAEWEIAS QQFKWGARWE WTNSAYLPYP GFTKAPGAVG EYNGKFMVNQ MVLRGASVMT PEGHSRHTYR NFFHPQHQWQ FTGIRLAE
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