Gene Cpin_4438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4438 
Symbol 
ID8360611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5531731 
End bp5532243 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content46% 
IMG OID644966595 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_003124083 
Protein GI256423430 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.410531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.561407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATACG CATTTAGAAG AGCCCTTAGC ACAGATCAAT CCCGGATATG GGACATCCTG 
CAGCAAGCAA TCCTTCGCAG AAAAGAAGAT GGCAGTAAAC AATGGCAGGA CGGCTATCCC
AATCCGGATG TTGTACGGAA AGACATCGAG GCAGGCATTG GGTTCGTGTT GACAGAAGAT
GATACAGTCG TCGGTTATAC GGCCGTGTTG ATCAACGATG AACCGGCTTA TGCGGGTATT
GAAGGGAAAT GGCTCACGAA TGAAGACTTT GTCGTGGTAC ACCGGGTAGC AATTGCACAG
GAGCAGCTGG GGAAAGGCTT ATCTGGAAAA ATCATGGCGT TTGTAGAAGA TTATGCCATT
GAAAACCAGG TATATAGTGT AAAAGCAGAC ACCAATTTCG ACAATCCTGC GATGATGAAG
ATCTTTGAAA AACGCGGGTA TATCTATTGT GGAGAGGTGT ATTTCAGAGG ATCGCCGAGA
AGGGCTTACG AAAAGGTATT GACGAACGAA TAA
 
Protein sequence
MAYAFRRALS TDQSRIWDIL QQAILRRKED GSKQWQDGYP NPDVVRKDIE AGIGFVLTED 
DTVVGYTAVL INDEPAYAGI EGKWLTNEDF VVVHRVAIAQ EQLGKGLSGK IMAFVEDYAI
ENQVYSVKAD TNFDNPAMMK IFEKRGYIYC GEVYFRGSPR RAYEKVLTNE