Gene Cpin_4437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4437 
Symbol 
ID8360610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5530554 
End bp5531747 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content49% 
IMG OID644966594 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003124082 
Protein GI256423429 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.483718 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCGG AAACTGCAAA GCCATCCTAT ACAAACAATG CGGCTTTGGG GATTGCGCAG 
ATCCTGCTCT GGGGCGGGTC TTATTTTATA CTATCGGTCT TGTCCAAACC TATCATGCAG
GAAACCGGCT GGTCGTATCA GATGGTGTAC AGCGCCTTGT CGCTGGCCCT GCTGATCTCC
GGACTGGTAC TTCCCCGGAT AGGGCGTATC ATCGACGCTT ATGATAAGAA TTATATCTTA
AAGTATGCCG GTGTGACCAT GGCCTGCGGA CTGATACTCA TGGGTTTTTC GCGGCACTTC
GTGCTTTACC TGTTCAGCTG GACCATCATC GGCATCTCCA TGGGAATGGG TTTGTATGAT
GCTTTATTTG CCTCTCTTGG CAAGAAATAC GGTCCCGGCA CGGGAAAGGT TATTGTACAG
GTAACCCTGA TCGCTTCTCT GGCGCCTTCA ATTTCCTGGT ATTTCTTGTC CCTGATGCTG
GATACTTATA GTTGGCGGAC AGTCTGTTTT ATCTACGCGG CGATGTTGCT GCTGACGATA
TTCCCCCTGT ACAACTTTGT ATTCCGGCAG CCGGGCAACA CACACAGCAA ACGACCGGTG
GTCAGGGATA CACTTCAGGG ATCCAGGGAA ATACTAAAAG GACAGTTATA TTATCTGCTC
CTGGTTCATT TTACCATCGG CGCTGTAGTG ACGACCGGCA TCATCGTACA CCTTATTGAT
ATCCTGTCGG ATAAAAGTAT GTCCATGACA GCGGTCATTG GTACGGTGGC ATTCCTTGGT
CCCAGTCAGG CAGGTGTCAG GGTATTGGAG CTGCTGGTTT CCCGGAAATC TTCCTTACTC
TCAGCCGTCA TCTCAGGCAT AGCGATTATG GCGGGTATTC TGTTGTTATC CACAGCGCCC
ATCGTTGCCA TCTCGGGAGT AATTATCCTG GGCATGGGTA ACGGGATGCG TTCAATTTTA
CGGGGCACAC TTCCGCTGGA GATCTTCGGG CAGAAACAGT ATGCACTGAT TATTTCCAAA
CTGGCGCGGA TGCCTCTGAT CGCACAGGCG CTGACGCCCT TCATCACAGG CTGGCTGATC
CAGCAGTTCA GCGTATCGGT ATTTCTTTAT ATCTTTTGCA CGCTGGCTTT TATCAATATA
ATTTTGTGTT GTATCATCAT TAAACAGACT AAGAAAAATG GCATACGCAT TTAG
 
Protein sequence
MPSETAKPSY TNNAALGIAQ ILLWGGSYFI LSVLSKPIMQ ETGWSYQMVY SALSLALLIS 
GLVLPRIGRI IDAYDKNYIL KYAGVTMACG LILMGFSRHF VLYLFSWTII GISMGMGLYD
ALFASLGKKY GPGTGKVIVQ VTLIASLAPS ISWYFLSLML DTYSWRTVCF IYAAMLLLTI
FPLYNFVFRQ PGNTHSKRPV VRDTLQGSRE ILKGQLYYLL LVHFTIGAVV TTGIIVHLID
ILSDKSMSMT AVIGTVAFLG PSQAGVRVLE LLVSRKSSLL SAVISGIAIM AGILLLSTAP
IVAISGVIIL GMGNGMRSIL RGTLPLEIFG QKQYALIISK LARMPLIAQA LTPFITGWLI
QQFSVSVFLY IFCTLAFINI ILCCIIIKQT KKNGIRI