Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4418 |
Symbol | |
ID | 8360591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5510560 |
End bp | 5511798 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644966577 |
Product | transposase IS4 family protein |
Protein accession | YP_003124065 |
Protein GI | 256423412 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3385] FOG: Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000316762 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAA GTAAATTTTT TTCCGGACAG CCGATTTTTA ATCAACTACT TTCTTTTATA CCAACCACGT TGATAGATAA AGTCTGTAGA GAGACAAACG CAGATTACTA TTATAAGCAT TTTAAGGCTT TTGACCATTT GGTAACAATG CTATTTAGTA GTTTTCATCA GTGTACTTCA TTACGAGAGC TTCATACAGG ATTGTTAGCC AACCAGCATC GGCTTCACCA TTTGGGCATT AAACATACCC CGCGTCGAAG CACTATTTCC GATGCTAACA GGACGCGTCC GGTGGCGTTT TTTGAAAAGC TTTATCATCG TCTATATAAC CATCATTATC AAGCGTTTTC CCCGGACAGC CGAAAGAGAA AATCGTTGGT TGACCGGTTA TTCATAGTGG ACTCGACGAC GGTCAGCCTA TTTTCTAATG TAATGAAGGG GGCAGGTGTA ATTAGAATGG ACGGCAGAAA GAAGGGAGGA ATAAAGGCGC ACGTATTGAT GACGGCCAAA ACAGAACTAC CAAGCTTTAC TATTCTGACG GAAGCTGCCA AAAATGATAG AATCATTATG CCACAGTTAG AGCTCTTGCC AGGTTCTATA ATAGCCATGG ATAGAGCTTA TGTGAACTAT AAACTCATGA AGGAATGGAC TGAAAAAGAG ATCACGTGGG TAACTCGTGT AACCAAGAGT ATGAAAATAA AATTATTGAC ACGAAACAGA TTAAAAATAC TCAATAAAAG AAAAGGTATC CTAAAAGATT GGGTTATTCA ACTAGGTAAC CCTCTAACAG AGGAGAAAAG TCCTGTACAG ACGGCGCGTG TAATCAGCAT TTACGATAGA AATACAAAAA AGAAAATACA TCTGTTAACA AACAATTTTA CTTATACGCC GACAACGATC AGGAAATTGT ATCAAAAGCG ATGGGCAATC GAAATGCTTT TTAAAAGAAT TAAGCAGAAC TCTCAATTAA ACAATTTTTT AGGTGAAAAC AAAAATGCTA TAAGTATACA GCTCTGGTGC ACGCTAATAA AGGATTTACT GACAAAGATC GTAAAAGACA AGCTGACAGA GAAAGGGAGT AAAAAATGGT CTTTTAGTAA CCTAACTGGC TTTCTAAGGT TACATCTTTA CACTTATATC CACCTAATGA ATTTTCTGGC AGAACCCGAG TATGCACTTT TACAGCATAA TAAGGGGCCA GATCAGATAA ACCTGCAATT GAAATTATTC TCCTTTTAA
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Protein sequence | MSKSKFFSGQ PIFNQLLSFI PTTLIDKVCR ETNADYYYKH FKAFDHLVTM LFSSFHQCTS LRELHTGLLA NQHRLHHLGI KHTPRRSTIS DANRTRPVAF FEKLYHRLYN HHYQAFSPDS RKRKSLVDRL FIVDSTTVSL FSNVMKGAGV IRMDGRKKGG IKAHVLMTAK TELPSFTILT EAAKNDRIIM PQLELLPGSI IAMDRAYVNY KLMKEWTEKE ITWVTRVTKS MKIKLLTRNR LKILNKRKGI LKDWVIQLGN PLTEEKSPVQ TARVISIYDR NTKKKIHLLT NNFTYTPTTI RKLYQKRWAI EMLFKRIKQN SQLNNFLGEN KNAISIQLWC TLIKDLLTKI VKDKLTEKGS KKWSFSNLTG FLRLHLYTYI HLMNFLAEPE YALLQHNKGP DQINLQLKLF SF
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