| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4417 |
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| Symbol | |
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| ID | 8360590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5508497 |
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| End bp | 5510233 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966576 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003124064 |
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| Protein GI | 256423411 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000899968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA ACTATAGAAA ATATATCATA AACGCTGCGT TGATCACTGC AATGACAATG
GGCAGCTGTA CGAAACTGGA AGAAAGTGTG TATGACAGGG TTGACGAGTC GCAATTCCTG
ACCAGACGCG ATGATGTGAT CAGGGACTTT TTACGCCCGT TTGAGCACGC TTACTGGAGT
ATCCAGGGAA ATGACGTCTA TGCGGTGGGT GAAAACAGTA CTGATGAAAT AGGCACTTAT
AACCGTCAGG GTGACTGGCA GGATGGTGGT TATTATCAGC GTATGCACTA TCATACCTGG
ACGAACCAGG ATGGTTTTAC CAATGGCGCC TGGACGGCTT TCTACCAGGG TATTGTACTG
GCTACGAACT CACTGCAGGA CATGGAGGGA ATCGCTGATC CGAGGAGGCT GAATGTCACG
CCTACGGAGC TGGCTGATTT TAAGGCGGAA CTGAGAACGC TGCGCGCCTG GTTTTATATC
AGGGCGTTTG ATTTCTACCG CAATATTGTG CTTGTACATG ATGTGAAAAA CACGACGGTG
AGCGGTCCAC AGTCGCCGCC CGCAGAAACC TTTAAATACA TAGAGGAAGA GCTGAAAGCG
GCGCTGCCTG ATCTGCCTAA ACGCGAAGCG CTGGGCGAAA AAGGTATTGG CAGGTGGACA
CAGGCAGGTG CGGCTGCTTT ACTGGTAAGA CTGTATCTGA ATGCACAGGC GTATATCAAG
GAAGACAGGT TTGCAGATTG TGCGGCGGTA TGTCAGGATA TCATCGATGG TAAGTATGGT
AGTTATCAAC TGGATACCCG CTGGGATGCG CCGTTTGATT ATACGAATAC CTCTTTGAAT
TCAGAGACAA TTTATGGGTT CCCTTCCAGT TTGTCTCGTA CACACTGGCA GTATGATGGC
GGCATGTATT TCTGGTCCAT GACCTATGAT GCGGCACCTT TGTATTGTGG TTTTACGGAT
TTCGGCAAAT CCAATCCAAG GTTTGCGTTA CAACCCGGAA GGAATGTTGA TAGTGTTGAG
TACAATTTCC AGCTGGGTAA GCCTTTTGTT AAGTTCCAGC GTTATCCGGA CGACCTTCGA
CTGAAGCTTT ACAAGAATCT TGGCAACAGT AAACGTGAAG GGATGTTCCT GTACGGTTAC
CTGCCTTTTC AGCGTAATGT AAATGGCAAC TCCGTACCTG ATACCGTACG CGGTAACAAG
GGGGATTATC CGTTGTTTAT CCGCGATCAG GTGGGTTGGT TTTTGGGAAC GAAGCCTGGT
CAGCCGGTAG CAGATAAAGA ATCCAATATG AACCATGCTG ACCATAATTC CGGTGTGTTC
CTGATGAAAT ATCCGGTATA TCCGACACCG GATCCCAATC GTATCACTTC GGCTTATGCG
GAGGTACGTT TATCAGAGAT TTATTATTCA CTGGCGGAAT GTAAGTATCG GTCGGGCGAT
AAGGCCGGCG CGGCTGCTTT ACTGAATGCA GTGCGTAAGC GTAACTATCC GGACGAATCT
ACAAGTTTGT ATAAGCTGGA TGGTAGTCAG CTGAACGACC AGGAGATGCT GGATGAATGG
GGACGTGAGT TTTTGGGTGA GAACCGCAGA CGTACGGATC TGGTACGCTG GGGCGTATTT
AATACGGGTA CCTGGTGGGA TAAGCAGCCA GATGCAGATG ATCATACCGC GATATTCCCG
ATAGGAAGAG ATATTCTCGG GGCAAACCCA CAGTTTAAAC AGAATCCCGG CTATTAG
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| Protein sequence | MKKNYRKYII NAALITAMTM GSCTKLEESV YDRVDESQFL TRRDDVIRDF LRPFEHAYWS
IQGNDVYAVG ENSTDEIGTY NRQGDWQDGG YYQRMHYHTW TNQDGFTNGA WTAFYQGIVL
ATNSLQDMEG IADPRRLNVT PTELADFKAE LRTLRAWFYI RAFDFYRNIV LVHDVKNTTV
SGPQSPPAET FKYIEEELKA ALPDLPKREA LGEKGIGRWT QAGAAALLVR LYLNAQAYIK
EDRFADCAAV CQDIIDGKYG SYQLDTRWDA PFDYTNTSLN SETIYGFPSS LSRTHWQYDG
GMYFWSMTYD AAPLYCGFTD FGKSNPRFAL QPGRNVDSVE YNFQLGKPFV KFQRYPDDLR
LKLYKNLGNS KREGMFLYGY LPFQRNVNGN SVPDTVRGNK GDYPLFIRDQ VGWFLGTKPG
QPVADKESNM NHADHNSGVF LMKYPVYPTP DPNRITSAYA EVRLSEIYYS LAECKYRSGD
KAGAAALLNA VRKRNYPDES TSLYKLDGSQ LNDQEMLDEW GREFLGENRR RTDLVRWGVF
NTGTWWDKQP DADDHTAIFP IGRDILGANP QFKQNPGY
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