| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4416 |
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| Symbol | |
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| ID | 8360589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5505487 |
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| End bp | 5508477 |
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| Gene Length | 2991 bp |
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| Protein Length | 996 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966575 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003124063 |
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| Protein GI | 256423410 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000494503 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTTAA AAATTCTACG ATTACTGAGC TGCTTTGCCC TGATCTTAGT CCACGCTTAC
CCGGTACTTG CCCAGAACAG AGTCATAGAA GGTAAAGTTA TTGACTCTTC CAGCAACAGT
CCATTACCAG GAGTGACTGT CAGAATTGCA GGTACCAAAT CGGGCACCGC CACCGACATC
AACGGCGTAT TCCGGCTGAC GCTTACGGCT GATGCCCGTG AACTTATTTT TTCTTCCATT
GATTATGCAC CCCAGACAGT TGCTATTGCC AACCAAAGTA CTTTCTCTGT AAAACTTGCT
CCGCTCAGCC GTGAACTTAA AGGCGTTGAA GTGGTGAGTG TAGGTTATGG TACAATGGAC
AGAAAGGAAG TTTCCAGTGC GATTACGCAT GTGCGGGCGG AAGATCTGAA ATCTGTTGCT
GCCAATAACC CGCTGATGTC CTTACAGGGA AAGGTAGCCG GTTTAACCGT ATCCAACACC
TCCACGGCTG ATCCTAACTC CTCTCCGAGC ATCCAGCTGC GAGGCGTATC CTCCCGTAGT
GCGGGTCTGG GACCTTTGTA TGTCATCAAT GGCGTACCAG GTGGTAATAT CGACAACATT
AACCAGAACG ATATCGAATC CATCGACGTG CTGAAAGGCG GCGCCGCTTC AGCGATTTAC
GGTACGAGAG GTAGTAATGG TGTCATCATC ATCACAACCA AGAAAGGCAC TGGTGATTCC
AAAATGGTAT ACAGTGGTTA TGTGAGCATG GATCGTCTCA CCATGAAGCC TGAAGTACTC
ACGGCAGAAG AGTTCCGGAA GTTCCGTGTC GGCGCTACAC CGGCACAGGG TATCGACTAT
GGCGGTAATA CCGACTGGAT GAAATCAGTC ACCCGTGAGC CTGCGTATGC ACAGAAGCAT
ACCCTGCAGA TTTCCGGTGG AACGGCCAGG GATAACTATT TCGCTTCGGC TGATTACAGG
AATGCGGATG GTATTGACCT GCGTGCTTCC AAAAAGGAAT ATGGCGCACG TCTGAACCTG
AATCATACTT CCAAAGAAGA TGTTTATACG GTTTCCTTCA ATGTTGCACC GAGGTATATG
AAAACCAGTA ATGCAGACCA GGGAAACTTC AATAATGCGC TTACGCTGAA TCCGACGCTG
CCTATTTACG ACAGCACCGG CTATCGTTAT ATCAATACCG GCTTTTTCTC CAATAATCCG
GTGGAGAATG CACGGCTGAT CAAAAGTCAG GCGGAGATCA AACAACTGGA TATGAGCGGC
TCTTTCCGGG TCAATATCAC CAGGAATCTG AACTCCATGG TGACGATCTC CAACATCCGG
TCTTCCTACA AGAATCTGTT CTTCTCTCCT TCTACCCTGA CGACGATTGT ACATGCAGGG
CAGGTAACGA AGACGAACTA TGCTTCACAG GAGCAGCAGG ATAATGACCA GCGTAATCTG
GAATGGACCA TCAATTATGC GTTGAATCTG AACAGGAATC ACTTTAAGTT CCTGGGCGGT
TATTCTTACA GCTACTTCAA TTACCAGCAA TTCGCGGCTA ACAACTATGA TTTTCCATTC
GATACTTTCC TGTGGAATAA TCTGGGTTCC GGTACCTGGA ATGGAGGTGA TAAAGGCAAC
GGACAAAGCG CAGTGTCTTC CACACAGAAT GACTCCAGAC TGGCCGCATT CTTTGGCAGG
ATCAACTATG ATTATGATAA TAAGTATATC CTGACGGTGA GTCTGCGTCA TGAAGGTTCT
TCTAAATTCG GCAGAAACAA CAAATGGGGT AGTTTCCCGG CGGTATCTGC TGCATGGCGT
ATCTCTGACG AGGATTTCCT GAAGGATAAA ATCAGCTGGC TGAATGACCT GAAACTGAGA
GCCGATTACG GTGTGACCGG TAACCAGGAT TTTGGTAATT ATCTGTCCTT ACTGTTGTAT
GGCGGATATG GTTATTTCCC TTTCAACGGC ACGACTTACC AGGTGTATGG ACCTTCGCAG
AATATCAATC CTAACCTGGG TTGGGAAAAA GCAATCAACT TTAACGTAGG TCTTGACTTT
GATCTGTTTA AAAGCCGTGT GTCAGGTTCG GTGAACTACT ATGTACGTAC CAACAAGGAC
CTGCTGGGTT ATTACAATGT ACCGTTGCCA CCCAATCCGC AGTCACAGAC CTTCAGCAAC
GTGGGTACTA TGAAAAACAC CGGTCTGGAA ATCCAGCTGA ACGGATCCGT GGTACAGTCA
AAAGACTTCA GCTACAATGT GTCTTTTGCG ACGGCTTTAA ATAATAACAA ATTCGTCTCT
TTCTCTAATA AACTGTACCA GGGAGCACCA TTCCAGGATG TAGCGGGATT ACCTGCACCA
GGTAGTCCGG GTAACATCCA GCGTTTACAG GAAGGACATC GTATCGGGGA CTTTTACATG
CTGAAGTCAG CAGGTGTAAA TGAGAATGGC GCATTGCTGG CGTATAAAAA AGACGGCAGT
ATTGTAACGG CTAACCAGAC TAATGCAGAT GATAAGCAGT TTGTGGGGAA TGGTTTGCCG
AAATTCACCG GTTCATTAGG TAACACTTTC CGTTATAAGA ACTGGGACCT GAATATCTTC
TTCAGGGGTA ATTTCGGCTA CAAGCTGTTC AACATGCAGG CATTTTATGT GGGTACGCCG
GCTACACAGT CCGACGCCAA TACGCTGAAA TCTGCCTACG ATCCGAAGAG CAAGTATGCT
AAACTGACCA GTTCTTCTAC CACAGCCCTT GCTTCCGACT ATTTCCTGGA ATCGGGTTCT
TTCGTGAAGA TCGACAACGT ATCGCTGGGT TATGGCCGTG AAGTCAATTC CAAGTACCTG
CATGCGTTCA GGGTATATGC TTCAGCGAGC AACCTGCATA CGTTCACCAG CTTCAAGGGA
GGCGATCCTG ATCTGTACCC TATTAACGGC TTAACGCCTG GCGTGCAGGG TAATCTGAAT
TTCTATCCGG CGACAATTCA GTTACTGGGA GGCTTACAGG TAACATTCTA A
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| Protein sequence | MFLKILRLLS CFALILVHAY PVLAQNRVIE GKVIDSSSNS PLPGVTVRIA GTKSGTATDI
NGVFRLTLTA DARELIFSSI DYAPQTVAIA NQSTFSVKLA PLSRELKGVE VVSVGYGTMD
RKEVSSAITH VRAEDLKSVA ANNPLMSLQG KVAGLTVSNT STADPNSSPS IQLRGVSSRS
AGLGPLYVIN GVPGGNIDNI NQNDIESIDV LKGGAASAIY GTRGSNGVII ITTKKGTGDS
KMVYSGYVSM DRLTMKPEVL TAEEFRKFRV GATPAQGIDY GGNTDWMKSV TREPAYAQKH
TLQISGGTAR DNYFASADYR NADGIDLRAS KKEYGARLNL NHTSKEDVYT VSFNVAPRYM
KTSNADQGNF NNALTLNPTL PIYDSTGYRY INTGFFSNNP VENARLIKSQ AEIKQLDMSG
SFRVNITRNL NSMVTISNIR SSYKNLFFSP STLTTIVHAG QVTKTNYASQ EQQDNDQRNL
EWTINYALNL NRNHFKFLGG YSYSYFNYQQ FAANNYDFPF DTFLWNNLGS GTWNGGDKGN
GQSAVSSTQN DSRLAAFFGR INYDYDNKYI LTVSLRHEGS SKFGRNNKWG SFPAVSAAWR
ISDEDFLKDK ISWLNDLKLR ADYGVTGNQD FGNYLSLLLY GGYGYFPFNG TTYQVYGPSQ
NINPNLGWEK AINFNVGLDF DLFKSRVSGS VNYYVRTNKD LLGYYNVPLP PNPQSQTFSN
VGTMKNTGLE IQLNGSVVQS KDFSYNVSFA TALNNNKFVS FSNKLYQGAP FQDVAGLPAP
GSPGNIQRLQ EGHRIGDFYM LKSAGVNENG ALLAYKKDGS IVTANQTNAD DKQFVGNGLP
KFTGSLGNTF RYKNWDLNIF FRGNFGYKLF NMQAFYVGTP ATQSDANTLK SAYDPKSKYA
KLTSSSTTAL ASDYFLESGS FVKIDNVSLG YGREVNSKYL HAFRVYASAS NLHTFTSFKG
GDPDLYPING LTPGVQGNLN FYPATIQLLG GLQVTF
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