Gene Cpin_4395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4395 
Symbol 
ID8360568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5469795 
End bp5470697 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content46% 
IMG OID644966554 
Producthypothetical protein 
Protein accessionYP_003124042 
Protein GI256423389 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.198402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0643344 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAGAT CACTACTGTT AACACTCACC ATCCTGTCTC AAAGCCTTGT CTTTGCGCAA 
CAGCCCATAA AACGATCGGG TAAGTACCTG GGAGAACAAA CACCCGGTAT GACACCGGTT
AAATTTGCCC CCGGCCTGAT CTCCCTGCCG GATCAACATG AATTCGGCTC TATATTTTCA
GCGAACGGAG AGGAATGTTA TTTTGCCGTT GATAGCAAGG GTAAAGCTGA AATCAGGCAT
ACGAAACTGG TCGGCGGCCA ATGGACAAAA CCCCTGACAA TACTTTCTGA TAAAGTATAC
AGCTACAATG ACCCAATGCT GTCTCCTGAC GAAAGTAAAC TGTTTTTTAT CTCCGATCGT
TCACCGGATG ATACAGGTAA AAAAAAGGAT TATGATATCT GGTATGTAAA GCGAAACGGA
GATCGCTGGT CCGCACCAAT CAATGCCGGT CCGGCCATCA ACTCTTCCCG ACACGAATAC
TATGTCTCTT TTGCTAAGAA CGGCACCATG TATTTTTCGT CTAATAAACA TGCCGATGCC
AATAGAACAA ACAACTTTGA TATCTATGCT GCCCTCGCCG CACAAACAGG ATTTCAACAA
CCTTCACGCC TCGCTGAGAC CATCAATACC GGACAATATG AAGCGGATGT ATTTGTAGCA
GCGGATGAAT CTTATATTAT CTTCTCAGCG GCACATACCG ACGGATATGG CGCCGGAGAT
CTTTACATCA GTTTCAGAAA AGCAGATGGT TCATGGAGCC ACGCAAAGAA TATGGGCGAC
ACCATCAATA CACCCGGTCA TGAACTCTGT CCCTTTGTGA CTGCAGACGG CAAATACCTG
TTCTATACCA GCCGACAGGA CATCTACTGG GTAGATGCCA CAATCATCGA TAAATTCAGA
TAG
 
Protein sequence
MLRSLLLTLT ILSQSLVFAQ QPIKRSGKYL GEQTPGMTPV KFAPGLISLP DQHEFGSIFS 
ANGEECYFAV DSKGKAEIRH TKLVGGQWTK PLTILSDKVY SYNDPMLSPD ESKLFFISDR
SPDDTGKKKD YDIWYVKRNG DRWSAPINAG PAINSSRHEY YVSFAKNGTM YFSSNKHADA
NRTNNFDIYA ALAAQTGFQQ PSRLAETINT GQYEADVFVA ADESYIIFSA AHTDGYGAGD
LYISFRKADG SWSHAKNMGD TINTPGHELC PFVTADGKYL FYTSRQDIYW VDATIIDKFR