| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4387 |
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| Symbol | |
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| ID | 8360560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5453973 |
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| End bp | 5457143 |
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| Gene Length | 3171 bp |
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| Protein Length | 1056 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966546 |
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| Product | hypothetical protein |
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| Protein accession | YP_003124034 |
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| Protein GI | 256423381 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.95296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00457818 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGTTGT ATCAATCCCT GCCGGGAACA GGCCGCCTGC CCGGTTTTAT CACCTTATTA
TCACTATTGC TGCTCACCGC TTTTGCTACT CAGGCACGCC AGCAACAGCA TACGCTCCCC
CGGCTGATCC CCAGGTCTCA TGACGCTGTT GCTGTCAGCA AGGCCAATCG CATTCCTGCG
GGAGAAAGTG CCGGTATCGC TGATGTAAAC ATTACCCTGG CAGACCTGCA GATCGGTTCC
TTTGCATTGC CCATCACACT CCGTTACCAC AGTAATGGTC TCAAAGTAAA TGAAGTGCCT
TCCTCCTTAG GCGATGGCTG GTCTTTGCAT TACGGGGGTA TGATCAGCTT TCGGCAGCAT
GGGCTCAATG ATTTTAAAAC CGCAGGTCTC TTCGACGGCG GTATCAGCTC CGCTTCCATG
ACAATGCTGA AGTCCTTCCT GCGGGGGCAT ATGACGACCG GTCAGCAGCA TACCTGGCTG
GATAATCTGA TCAACAGCAA TGCCGACGCT GAATTTGATC AGTATCAGTA CAGTTATCCC
GGCAAATCCG GCGCTTACTA TTATGATACC CTCATGAATG TAGTAACGGT GCCCAAAAAC
GATATCCGGG TATTCCGGGG GAATAACGAA ATACGTGTGC TCGATAATCA GAACAACAAC
TACTACTTTG GTACACTGGA ACAGAGCACC GTGACAGATG CCTCCGTATA CGGATATACA
CCTGCTTTTG ATGATGTGGC TACTTACTAT TTATCCAGGA TAGTTACCAG TCAAAACAGG
ACGATCCTGT TCAGGTACAG AAAATACAGC TATTCCGTAC AGCAACAGAA ATCCGCTGTG
GCATTTTCCG CGGTAGCAGG TACCTGTAGC GCCGACAACG GACAAGCCCT CTATACAAGA
ACAGTACAGA TCAATTGCCT CTTACCTGAC TCTGTCATTT ACGATCAGGG CTATGTTAAA
TTCGCTATCA GTACTATTCC CCGCGAAGAC ATCAAGGCAC TCCAGGATAC TGCCGCCATC
CCTTCCATCA CAGGACTCAG CATCTTTGCC GGAAACAACA AAAAGATCAA ATCCTATTCT
TTTCTGCAAG GATATTTTGA TACCAATAAA CGATTGAAAT TATCAGGTGT ACAGGAATGG
AATGGCGATG CAACAGATAA ATTATGGCAG TTCCACTATT ACCGTGAACA GGATGCCTTC
CCGGCAATGT CCTCAAATGA CCAGGACCAT TGGGGATATT ACAATGCAGC AGGTAACGCA
GGCATGATCC CTGATATAGA CTATGCATCT TTGATTCCTG GCTGGAATGC ACCGGCTGCC
AACTATGGCA ACCGGAGTGC CAATATAGCC GCCCGCTATG GTATGTTGCA AACTATCATC
CATCCTACAG GTGGTAGTAC CGCTTTTGAA TATGAACCCA ACCAGGTCAG GGTAGAGGAT
TACAACACAC TCACCACCTT GTCTCCATTC CTGACAGTCC CTGGTGGTAC GCCAGTGCCT
TATGCAGTAG GTGGTGTACG CATAAAGACG ATTATTACCA ATGATAGTAT AGGTACGCCT
TCCAGCTACC GGACGTACCA GTACGCCGAT AGTCTCAACC AGGTGGCCTT CCTGGATATT
CCTTACTACA TCGCAAAGAT GGAATATAAC AGGGATAGTG CAGGCGCTTG TCTTGCCTGT
GGACAGTCGG CAACTGTTTT TGATGAAAGT GTCTGGCCCT TAGATGCGAT CCCTGTTATT
TACAGCCACA TCACCGTGTC TGATTCCAGT GTTGCCGGCA GACAAGGTAA AACAGAAAGT
GTCTATTTAT TGCCGGAGAA TCATACCGTC AGCAATACCG CTCCCTACGT CACACCGCTT
AATACTTCCT GGCAGATCGG CACGCTCGTC AACAGAAAAC TATACGCACT CAAAGACAAC
GTCGATGAAC TGGTAAAAGA ATACCGCTAC ACTTACAAAG CCCTGGAAGA GAGTTATCAG
ACAACAGGCG TGAAAACTAA CTACGCACAA TACTGTACAC TGAATACACC CGATAACAAC
AACTATAATA CTTCCCTATC TACTTTCTTC TCAGACCGTT TTTACCTGCA GCAATCAAAG
GAAATAGATT ATCTGTCGGG ACAAACTCTG ACGAAACAGA TAGATTATGC TGTTAGCGGG
ATCAGACATA ATTTACCCGC TGTTGTCAGC TACCCGGACA GCAAGGGAGA CACCATCAAA
GAACGAATTA TTTACTCCTG GGATTATGAT ACTACGACTA CAACCGGTGG CGACGCTTTA
GCGATCCGCA ACCTGGGCAG ATTAAATGTC CTGGTGCCAA TTGAAAGAAT ACAAATCCGT
ACCATTGATG GCGTAGACTA CGTAGTCGGT GCAACGTTAA CTAATTACCG GACAGACCGC
CCCTTTCCGG ACAGGATCTA TGAGCTGAAC GTGCCGGCGC CTATTCCATT GTCTGCCTAC
ACGACAAGCA GAATCAGTGG CAACTTCGTC AGAGACAGTC GCTATGAATT GGTCACCACC
TTTAGTATGT ACGACAGCAA CAATAATGTG ACGGAGACAA CCGGCATTGA CGGTGTCCCT
GTCAGTTACC TGTACGGATA TAAACAGCTA TACAAGATAG CGGAGATTAC CACTTCAAGC
CGGCCATACG TCGCCTATAC GTCCTTTGAA ACAGATGAAC GTGGCGGCTG GGCATATTCA
GGTACGCCTG TGGTGGATGC TACATCTCCT GTCGGTGAGC GTTGTTATGA CCTGTCCACC
GGTACATTTG GCGTCGGTAA TATCGTGTTG CCCACAGCTG TACTGACCTA TTGGTCCAAA
AGTCCTACGC CTTTCGTATT TCCAAGGCAG ATTCCTTTTC AGCCTGCTAC AAGCGGGAGA
ACAGTCAATG GATGGACTTT TCATATGCAC TGGTTGTCGG GGCAGTTTCC ACAGGATATC
GTTTTTCCTT CTTCTGGTTT CATAGATGAT GTAAGAGTCT TCCCGCTGAG ATCTCAGATT
AAATCATATA GTTATCAACC TCATACAGGG ATGACAAGTG AGTGTGATGA CCGTGGCAAC
ATCACCTACT ATTCCTACGA TGAAACAGGA CGGTTAAAAA TGGTACAGAA TGGGGATCGT
GCGATCCTCA AACTAATCGA TTACCAGTAC ATGAAACCTA TTACAGAATA A
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| Protein sequence | MSLYQSLPGT GRLPGFITLL SLLLLTAFAT QARQQQHTLP RLIPRSHDAV AVSKANRIPA
GESAGIADVN ITLADLQIGS FALPITLRYH SNGLKVNEVP SSLGDGWSLH YGGMISFRQH
GLNDFKTAGL FDGGISSASM TMLKSFLRGH MTTGQQHTWL DNLINSNADA EFDQYQYSYP
GKSGAYYYDT LMNVVTVPKN DIRVFRGNNE IRVLDNQNNN YYFGTLEQST VTDASVYGYT
PAFDDVATYY LSRIVTSQNR TILFRYRKYS YSVQQQKSAV AFSAVAGTCS ADNGQALYTR
TVQINCLLPD SVIYDQGYVK FAISTIPRED IKALQDTAAI PSITGLSIFA GNNKKIKSYS
FLQGYFDTNK RLKLSGVQEW NGDATDKLWQ FHYYREQDAF PAMSSNDQDH WGYYNAAGNA
GMIPDIDYAS LIPGWNAPAA NYGNRSANIA ARYGMLQTII HPTGGSTAFE YEPNQVRVED
YNTLTTLSPF LTVPGGTPVP YAVGGVRIKT IITNDSIGTP SSYRTYQYAD SLNQVAFLDI
PYYIAKMEYN RDSAGACLAC GQSATVFDES VWPLDAIPVI YSHITVSDSS VAGRQGKTES
VYLLPENHTV SNTAPYVTPL NTSWQIGTLV NRKLYALKDN VDELVKEYRY TYKALEESYQ
TTGVKTNYAQ YCTLNTPDNN NYNTSLSTFF SDRFYLQQSK EIDYLSGQTL TKQIDYAVSG
IRHNLPAVVS YPDSKGDTIK ERIIYSWDYD TTTTTGGDAL AIRNLGRLNV LVPIERIQIR
TIDGVDYVVG ATLTNYRTDR PFPDRIYELN VPAPIPLSAY TTSRISGNFV RDSRYELVTT
FSMYDSNNNV TETTGIDGVP VSYLYGYKQL YKIAEITTSS RPYVAYTSFE TDERGGWAYS
GTPVVDATSP VGERCYDLST GTFGVGNIVL PTAVLTYWSK SPTPFVFPRQ IPFQPATSGR
TVNGWTFHMH WLSGQFPQDI VFPSSGFIDD VRVFPLRSQI KSYSYQPHTG MTSECDDRGN
ITYYSYDETG RLKMVQNGDR AILKLIDYQY MKPITE
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