| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4385 |
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| Symbol | |
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| ID | 8360558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5449368 |
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| End bp | 5450339 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644966544 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003124032 |
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| Protein GI | 256423379 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.357896 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.000854827 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGAGTTTA AAGTCTCCCC TCAACAGAAA CATTTAATTA AAAACATCAC TCACAAAGAA
AATGACCCAA AAGCCAATAT CCAAGGAGCC ACCCGCACAG TTATAAACGG TGACTTCGGT
TCCTTTAGTA TGGAAGTACT GAAAGGGCGT TCATTCATAA TCGGCTGGTT AAATGCGGTA
ATAAAAATAG CTATTGATAT TCTTCCTCAT ACAGACATAC CCATATTATG CTGGTATGGG
ACGCTTCGGG GCAATGTGCC CTGTACTTTG TCAGGTAAAG GTCCTGTACC ACTTAATGAG
TTGTATCAGG CTATCTATTA TGTACCCGCT CATGGCACCA ATATAGCCCG CTTTCCCGTA
GGCAGATACG AGGCCGTATA TATTTCTGTA TCGACCAGTT TCTTTGAAGA TTTCTTCAGA
ACACACCCAC AGTTCCGTGA AATATATGAA AGCAAGCATA AATGTTCGGA AGAAGGTATT
GTACTCCCCT ATTTCGATCT TTCCATTAAT GTGACAAGCA TACTGGAACA GATACACGAT
CACCAGAAAG AGGGAGAGGC TATGGAACTA TTTCTGGATC TCAGCATCAG AAAATTGTTC
TATCACTACT TTATTACTTT AGCGCAATCT GAAAAAGATG AATGGATTAA TGTTATCAAA
AAAGAGATTG ATGACAATAT CGGCGCGGAT ATCAAAATAA GTACGCTGAC ACAAAAAATA
GCGTTTCAGA ACGGCGGCCG TGCCAACCGT GAATTCAAAG CACGGTTTGG GGTGACAATT
AAGACCTACG TAAGGCAACA GATATTGCTG CGGGCGGAAT GTTCACTGAT ACACGAAAAA
AGCAAAACAA TCGCGGATAT CGCATCCGAA CTTGGATTTA CCGGACAATC TTACTTTACT
ACTTTCTTTA AAAAATGGAA TGGTATGACG CCCAGTGAAT TCAGGAACCA GGCTGACACC
CTGACGGAAT AA
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| Protein sequence | MEFKVSPQQK HLIKNITHKE NDPKANIQGA TRTVINGDFG SFSMEVLKGR SFIIGWLNAV
IKIAIDILPH TDIPILCWYG TLRGNVPCTL SGKGPVPLNE LYQAIYYVPA HGTNIARFPV
GRYEAVYISV STSFFEDFFR THPQFREIYE SKHKCSEEGI VLPYFDLSIN VTSILEQIHD
HQKEGEAMEL FLDLSIRKLF YHYFITLAQS EKDEWINVIK KEIDDNIGAD IKISTLTQKI
AFQNGGRANR EFKARFGVTI KTYVRQQILL RAECSLIHEK SKTIADIASE LGFTGQSYFT
TFFKKWNGMT PSEFRNQADT LTE
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