| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4367 |
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| Symbol | |
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| ID | 8360540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5430970 |
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| End bp | 5431830 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644966527 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003124015 |
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| Protein GI | 256423362 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0906731 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGCA AAGCCACAAT CTATACCATC AAACAGGCCT TGTACAACGC GGTCGAAATA
TTCACAGGCC GCGGTATCCA ACATTGGAGT ATTGAGTGTT TTTGTAAAGG AAACTGTTTA
GCGAAAGATC ACCTGCTTCT TTTTGTTGAA GCAGGCCAGT TAGACATACA ATTTGGACAT
ACCCTTTATC ATGTAGAAAA GCAACAGCTT GTTTTTGTGA GAAAAGACAC CTGCTTTCAA
TATGAGTCAT GCGCTACCCC CTTGAGCATG ATTGTATTTG AACTAAAGTA TGATATCATT
GTCGGATTTG TTGCTATGCT TAATCTTCGA ACACGAGGAG AAGGTACCTG TTTGCCGCTG
CTTACCGGTG ATACAAGCGA GCTATTAAGA GAATATATGT CTTCACTGCA GCTTTATTTT
AATCAATACC CCAGCCTTTC AGCCAGCCTT ACCAGAATGA AACTGGTTGA ACTCCTGATC
TGTCTGTCTG CAAATGACAG GTCGTTTTTT GAACAACTAT TGTTTGTAAA AGAAAGTATC
CGTCCCGATA TTACCCGGCT CGTGGAAGAA AATCTGACGA ACGCCATTTC CTTGAATCAG
CTCGCGCGAT TAGCCGGTAG AAGTGTTTCA AGTTTGAGAA GGGATTTTAT TTCCATCTAT
AATATGCCTC CATCCCGTTG GATACGGCAA AAGAAACTGG AAAGAGCAAA AGAACTGCTG
GTGAATACGG ATATGACGGT AACAAGTATC TGCTATACAC TGGGGTTTGA AAGTGTGGCC
CACTTTTCAA GGGCCTTCAA ATCCTATTTC CGCTATTCGC CCTCCGGACT GAGGGAAGGT
GCCTCCGTGG CAACCACCTG A
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| Protein sequence | MQSKATIYTI KQALYNAVEI FTGRGIQHWS IECFCKGNCL AKDHLLLFVE AGQLDIQFGH
TLYHVEKQQL VFVRKDTCFQ YESCATPLSM IVFELKYDII VGFVAMLNLR TRGEGTCLPL
LTGDTSELLR EYMSSLQLYF NQYPSLSASL TRMKLVELLI CLSANDRSFF EQLLFVKESI
RPDITRLVEE NLTNAISLNQ LARLAGRSVS SLRRDFISIY NMPPSRWIRQ KKLERAKELL
VNTDMTVTSI CYTLGFESVA HFSRAFKSYF RYSPSGLREG ASVATT
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