| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4364 |
|---|
| Symbol | |
|---|
| ID | 8360537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 5426188 |
|---|
| End bp | 5428611 |
|---|
| Gene Length | 2424 bp |
|---|
| Protein Length | 807 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644966524 |
|---|
| Product | signal transduction histidine kinase |
|---|
| Protein accession | YP_003124012 |
|---|
| Protein GI | 256423359 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3920] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.217771 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAGAA TACTTTTTAC ATATCTGCTT CTCAGCTGCT TATTGTCGAA AGTGTATGCA
CAATCGACTG TATTTACTGC AACAATCAAT CATTACAACG AATCTCAGAA GCGTCTGCTT
GCCACAAACA TCGGACGCTT TTTTTATGTT GTGAACCAGG GCCAATGGGA CATGGATAGT
TGCGTACGAT ACGTTTGCAA AATCTACCAT CTTAATATCC AGTTGCCATA TGATGAAACC
ATCAATAACG GTAACCTGCA GCAGGAAGTT GCCTGGTTAA ATCAGCATGC TCCAAATCTG
CTGCTGCAAT CGATCCCCGG TGCAGCTGGA GAAAAGAGGG TTGCCATGTT ACTGGAACTG
GCGCTGTACT ATCTGCACAA GCCAGGCAAT GACCCATCCG ATCTTGAAAA TACAGCCACC
TATATAACTC AGGCGAAAGC GTATGCAAAG TCATTAAAGC TTATAAGGTG GCTGATTGAA
TGTGACGCAG TAGCCGGCGA TCTATATCTT CAGCAAGGCG ATGCAAAAAA GAGCTCGGAA
ACATTTGCCC TGGTGGCCTC TTTTTTAAAG AATAACGGTG ATAAAAAAAG AAATGCAATT
GCCGTCCATC AGCTGGCGCT TCATTTGCCA TACAACGATG CCAACCGGCT TAGTAATCTG
GAAAAAGCAT TTGCAACATA CCAGGAGTTG CAGCTGAAGG AGCACGCCAT AGCAGCCCTT
GGCGATATTG TCACTTATTA CTTTTCATCG GATTGGTCGC TCGCAGAAGC AAAGCTTGGC
GAGTTATTAG TCATGCAAAA GCAAAGTGGA TACCGACACT TTATGGATAC TTATTACGTA
AGAGCGTATT TAAAGAATAA TAGGGCAGAC TACATCGGAA CTACCCTGGA TATTGACAGT
GCACTCACAA TCATGACTAA TACAGGCGAT TCAAGTATTT ACAGCATGGT ATGTACCAGA
ATGGGGTCAA TTTATATGGG TTTGGGTGAA TATCAACAGG CGAACGAATG GTATTTCAAA
GGAATCGAGC GACGTGCGAT TGAGCCACAG ATTTTATGGT ATACTAACCT GGAAGAGATC
GGCAAATCTA TGCCACGCTT AAATAAGGCA AATGAGTATC TGTCATTTAT ACGAAAGATG
CTTGCAGACT ATCCACCGGA AGGTGAGATA GATAGTATAA CCATGTCTGT CCGTCTCGGA
GAGGCATACT TACAGCTGCA TCAGCATGAT TCCGCTGAAA AATATTTCCA GCCATTCCTT
GCCTATGTAG AAAGAATTCC ACCGCAACAC CTGCAGATGC CAGATGTATT CGGATTTCAG
CAATATGCCC GTTTATGCTT TCAGAAAGGA AACTATCCGC TGGCAAGGGT TTATTTGCAG
AAAGTCGTAG AACATGCCAG GGGCAGACCT ACAATTATGT CGAGACTTGA GGTTTCCCGA
TTACAGTTTG CAATAGATTC AGCAGAAGGG AAGTTCCATG ACGCATTTTT CGCGCTCAGG
GATTATGTTT ATTTTAATGA TTCTGCCGTT AATATTAACC AACGATTTAA AAGTCAGGAA
GCCAACATCC GCTATGCCTC AGAGAAAAAG GACCAGGATA TTCAAATCCT GAAACAACAG
GGGTTGATCC AGGAAGGTAA TCTCAAACAG GCAAGGCAAA TGCGTAATAT CGTTTCAGGC
GGTATTATTT TATTACTGAT CATTGGGGCA TTGGGTTACA ACCAGTACCG TATGAAACAA
AAGAACCTGC TACTGATCGG TCAGAAAAAT GATCAGCTGA CGCAGCTGGT CAATGAAAAA
GAATGGCTGC TCAAAGAGGT GCATCACCGT GTAAAAAACA ACCTGCAAAC AATTGTAAGC
CTGCTGGAAA TGCAGGCCGA TTACCTGGGA GATGATGCGC TGGCAGCAGT ACAGGTCAGC
CAGAACAGGA TATTTGCGAC CTCTCTCCTG CATCAGAAAC TGTATCAGTT TGAGAATGTG
TCCTCTGTCA ATATGAAGAA CTATCTGCCG GAGCTGATCC AACATCTCAG GGAGGCTTTT
CCTGTAGGTA AGTCCATAGA TATACAAATG ACTATTGACG ATGTAGAGCT GGATGTATCG
CAGGCTATGC CGGTTGGCCT TATATTTAAT GAGGCATTTA CGAATACCAT GAAATATGCA
TTCAGGGACA ATAACAGAAG GGGAAAAATT ACCGTTTCAT GTGAAAAGGA TGCCGACAAC
TTTGTCAACT TACTGATTGC CGACAATGGC ATCGGATTTA ACGCCACAGG TGAAGCGCAT
ACTGATGGTC TCGGGCTTAG TCTGATTAAA GGTCTCGCCA TAGACATTGA CGGAGAGGCA
AAGATTGAGT CAGGCACTCA GGGAACAACG CTTTATATTC GTTTCAAAGT AAGGTCGCCC
CTATCCACTA ACAGATTACA ATAA
|
|---|
| Protein sequence | MVRILFTYLL LSCLLSKVYA QSTVFTATIN HYNESQKRLL ATNIGRFFYV VNQGQWDMDS
CVRYVCKIYH LNIQLPYDET INNGNLQQEV AWLNQHAPNL LLQSIPGAAG EKRVAMLLEL
ALYYLHKPGN DPSDLENTAT YITQAKAYAK SLKLIRWLIE CDAVAGDLYL QQGDAKKSSE
TFALVASFLK NNGDKKRNAI AVHQLALHLP YNDANRLSNL EKAFATYQEL QLKEHAIAAL
GDIVTYYFSS DWSLAEAKLG ELLVMQKQSG YRHFMDTYYV RAYLKNNRAD YIGTTLDIDS
ALTIMTNTGD SSIYSMVCTR MGSIYMGLGE YQQANEWYFK GIERRAIEPQ ILWYTNLEEI
GKSMPRLNKA NEYLSFIRKM LADYPPEGEI DSITMSVRLG EAYLQLHQHD SAEKYFQPFL
AYVERIPPQH LQMPDVFGFQ QYARLCFQKG NYPLARVYLQ KVVEHARGRP TIMSRLEVSR
LQFAIDSAEG KFHDAFFALR DYVYFNDSAV NINQRFKSQE ANIRYASEKK DQDIQILKQQ
GLIQEGNLKQ ARQMRNIVSG GIILLLIIGA LGYNQYRMKQ KNLLLIGQKN DQLTQLVNEK
EWLLKEVHHR VKNNLQTIVS LLEMQADYLG DDALAAVQVS QNRIFATSLL HQKLYQFENV
SSVNMKNYLP ELIQHLREAF PVGKSIDIQM TIDDVELDVS QAMPVGLIFN EAFTNTMKYA
FRDNNRRGKI TVSCEKDADN FVNLLIADNG IGFNATGEAH TDGLGLSLIK GLAIDIDGEA
KIESGTQGTT LYIRFKVRSP LSTNRLQ
|
|---|
| |