| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4356 |
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| Symbol | |
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| ID | 8360529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5417601 |
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| End bp | 5419412 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966516 |
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| Product | Glucan endo-1,6-beta-glucosidase |
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| Protein accession | YP_003124004 |
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| Protein GI | 256423351 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5520] O-Glycosyl hydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.641869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0330864 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA TTTATCTTCG GCTTGCCGCC GCAGGCATGC TTTGTATTGC ATTTTATGCA
TGTAAAAAGA ACATTAATAC AACAGATGCA ATTGATGACG GTCAGACAGT TGCCAGGGCA
AATGAATCTG TAAGCATCTG GATGACTACC GGCAACCAGA GTGCGCTCCT GCAACAACAG
GGTAACGTCA CATTTGCGCC TGATGCGGGT ACCAGTGGCA CCACCATTAC AGTGAACGAG
GGAACTACTT ATCAGGGTAT CGACGGTTTC GGATACACAC TGACCCAGGG TAGTGCCAAA
TTAATCAACA ATCTGTCAGC ATCCGCACAA ACGTCCCTGT TAAATGAACT GTTCAGTCCA
TCCAGCGGTA TCGGTATTTC AGTCATCCGT CTTGGCGTAG GCGCCACTGA CCTGAGTGAT
TATTCCTATA CCTATCGCGA TGGCGCTTCC TTTAGTTTAT CTGGTCCGGA TCTGACCTAT
ACCATTCCCA TCCTGAAAAA GATCCTGGCG ATTAACCCCG CGATCAAAGT CATCGCAACT
CCATGGACTG CTCCCCGCTG GATGAAAACA AACGGCTCTT TCGTTGGCGG TACACTCAAG
GCGGAAAACT ATGAAAGTTA TGGTCAGTAC TGGCTGGACT ATATGAACGC CATGAGAGGA
CAGGGCATCG AAATCTGGGC GATTACTCCC CAGAACGAAC CCCTGAACCC TTACAATGAA
CCCAGTATGA CACTGACTAA AGAGAACCAA CTTGGCCTGA TCAATGACTA TATCGGTCCT
AAGTTAAGGG GCGCTGGTTT CAACTGTAAA ATCATCTGTT ATGATCACAA CTGTGATAAC
ACAGAGTATC CTATTTATGT AGCGAATAAC AGTACTTACG TAGATGGATC TGCATTTCAC
CTGTATGGCG GGAATGTCTC TGCTATGACA ACCGTAAAGA ACGCCACTAA TAAGAATGTT
TACTTCACAG AACAATATAC TTCTGTGGGC GGGAGCTTTT CCGGAGACCT GTCCTGGCAC
ATACAGAATG TAGTAATCGG TTCATTGAAC AACTGGTCTA AAACAGTACT GGAATGGAAC
CTGATCAGCG ATTCTCAGGG CGGTCCTCAT ACACCAGGAG GCAGCACAGT ATCCATGGGC
GCTGTGACGA TCGATGGAGG TAACATCGTA CGCCGTGTTG GCTATTATAT CATCGGACAC
GTATCTAAAT TCGTCCGCCC CGGCGCAGTA CGTATTGGCT CTAACAATTC CGGTAATATC
CAGACTACCG CTTTCAGAAA CAGCGATGGT TCTAAAGTAT TGCTGGCGTT TAACAACGGT
GGCGGAAATG TTTCATTCAA AGTGAAATGG GGTAGTCAAT CCTTTACCTA CTCACTGCCT
GGTGGTGCTG CCGCTACGTT TAAATGGGCT GGCACTACCA CTACACCCAC AGGACCTATC
GGACAAAGCG TTACCCTGAA AGGTTTTAAT AACCAATACG TGAGCAGCGA GAATGGTACA
CAGGCAATGA ACTGTAACAG ACCAACTGCT TCCGGATGGG AAACCTTTTC TGTAGTAGAC
GCCGGCGGAG GGAAAATAGC CCTCCTCTCC CAGGGAAAAT ACGTATCATC AGAAAACGGT
ACACAGGCCA TGACCTGTAA CCGTCTTACA ATTGGTGACT GGGAGAAATT TGACTGGGTT
GTCAATGCCG ACGGCAAAAT ATCCCTCAGG GGTAGTAATG GTCAGTATGT AAGTTCTGAA
AACGGAACAC AACCAATGAA TTGTAACCGT GCCACAATAT CTGGTTGGGA AGCCTTTGGC
GTCAATCAGT AA
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| Protein sequence | MKKIYLRLAA AGMLCIAFYA CKKNINTTDA IDDGQTVARA NESVSIWMTT GNQSALLQQQ
GNVTFAPDAG TSGTTITVNE GTTYQGIDGF GYTLTQGSAK LINNLSASAQ TSLLNELFSP
SSGIGISVIR LGVGATDLSD YSYTYRDGAS FSLSGPDLTY TIPILKKILA INPAIKVIAT
PWTAPRWMKT NGSFVGGTLK AENYESYGQY WLDYMNAMRG QGIEIWAITP QNEPLNPYNE
PSMTLTKENQ LGLINDYIGP KLRGAGFNCK IICYDHNCDN TEYPIYVANN STYVDGSAFH
LYGGNVSAMT TVKNATNKNV YFTEQYTSVG GSFSGDLSWH IQNVVIGSLN NWSKTVLEWN
LISDSQGGPH TPGGSTVSMG AVTIDGGNIV RRVGYYIIGH VSKFVRPGAV RIGSNNSGNI
QTTAFRNSDG SKVLLAFNNG GGNVSFKVKW GSQSFTYSLP GGAAATFKWA GTTTTPTGPI
GQSVTLKGFN NQYVSSENGT QAMNCNRPTA SGWETFSVVD AGGGKIALLS QGKYVSSENG
TQAMTCNRLT IGDWEKFDWV VNADGKISLR GSNGQYVSSE NGTQPMNCNR ATISGWEAFG
VNQ
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