Gene Cpin_4347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4347 
Symbol 
ID8360520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5403913 
End bp5404980 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content47% 
IMG OID644966508 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_003123996 
Protein GI256423343 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0189212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGT TATTCACGTC TTATACAAAA GGCTCTTTAC AGTTAAAAAA CCATGTTGTA 
ATGGCCCCGA TGACCAGAAG CCGGGCACTG GGCAATGTAC CGAACGACCT TATGGCCACC
TACTATAAAC AGCGTTCCGG TGCAGGTCTG ATCATTACTG AAGGTACTTC GCCAAGTCCT
GAGGGATTAG GCTATCCGCG CATTCCCGGT ATCTTTTCCG AAGCACAGGT CGAGGCATGG
AAAGCAGTCA CGAAGGCGGT ACATGAGCGT GGATCCAAGA TCTTTTTACA ACTCATGCAT
ACCGGCAGAA TTGCGCATAT TGCCAATCTG CCGGAAGGAT ATCATCCGGT TGGTCTATCT
GACATCAAGG CAGCTGGTGA GATCTTCACA GATAAAGAAG GTATGCAGGA GCATTCTGTA
CCCCTGGCCC TGGATGCGCA GGGTATTGAA CTGCTGATCA ATGACTTTGT AAAAGCCGCT
GAAAATGCCA TAAAAGCAGG CTTTGATGGC GTAGAATTGC ACGGCGCTAA TGGTTACATA
CTGGAACAAT CGCTCAATCC ACATGTAAAT AACCGTACAG ATAGCTATGG AGGAACAATA
GAGAACCGCA GCCGCTTAAT CATAGCAATA GCCGAAAGAA CGGCCCGCGT TATCGGCGCT
GAAAAGGTGG GCGTACGTCT CTCTCCCTAT TCTGCATTGA GTGATATGCC GGCGTATGAT
GAGGCAGAAG TACATGCAAC TTATGCTTAT CTGAGTGGAG CACTGAACAA ACTGGGTGTC
GCTTATCTCC ACATTTCCGA CAATCCTGCA ATTCCGGAAA AAACACATCA GGCAATACGC
AGCGCTTTTT CTAATACGAT CATTTACTGT AACGGACTCA CACCAGAAAC CGCGGAATCT
AAGTTACAAG CCGGATCTGC TGACCTGGTA GCCTTTGGCA GAAGTTTCCT CGCCAATCCT
GACTTCATGA GGAGGATGGA AAAAAACGAC CCTTTAAATG AGGTGGATTA TATGACGTTA
TATACTCCTG GCGAACAAGG ATATACAGAT TATCCGGTAT TAAACTAA
 
Protein sequence
MKQLFTSYTK GSLQLKNHVV MAPMTRSRAL GNVPNDLMAT YYKQRSGAGL IITEGTSPSP 
EGLGYPRIPG IFSEAQVEAW KAVTKAVHER GSKIFLQLMH TGRIAHIANL PEGYHPVGLS
DIKAAGEIFT DKEGMQEHSV PLALDAQGIE LLINDFVKAA ENAIKAGFDG VELHGANGYI
LEQSLNPHVN NRTDSYGGTI ENRSRLIIAI AERTARVIGA EKVGVRLSPY SALSDMPAYD
EAEVHATYAY LSGALNKLGV AYLHISDNPA IPEKTHQAIR SAFSNTIIYC NGLTPETAES
KLQAGSADLV AFGRSFLANP DFMRRMEKND PLNEVDYMTL YTPGEQGYTD YPVLN