| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4346 |
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| Symbol | |
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| ID | 8360519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5402809 |
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| End bp | 5403789 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644966507 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003123995 |
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| Protein GI | 256423342 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.324951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0157196 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATTCA GCTTTTCAGC AACCGCAGAT TTTGATTTTA TGACCTACTT TGCCCGTCAT
ATCGGGGCAA CGGTAAATGA TAATTTGTTG GTAATACCTG CATATTTAGG AGAAGGATCC
ATTAATAAAC TGGATTTCGG TCCGGATTTC AAGATCACTA TTCACCGGTA TCTGCTGAAG
GAAGATCTTG TTATCAAACG TAATACTTCC GGTCAGGGGA ATGACCTTAT TACAATATTC
TTCTATAGCA ATGAACAACC ACTGGGTATT GCTTACAATG ACGACCCCTA TGTACAATTT
TCACAGCGGG AAGATTCAGC GATCCAGGTG ACCTCCAATG ACCTGAGTTC AACCATACGT
TTTCCGGCCA ATCATTCTAT TCATTATATG GTTGTTGCGA TCAAGCCGCC ATATCTTAAC
GCCCTCTTAG CCTCCAATCA GCTGAACTCC ACACTGCAGA CCATCACAGG CAGTGGTAAT
TCGTTTCTTT ACTTTGAGCG GATGACGGCA GAAACCAAAC TGTTGCTGAA AAACCTGAGT
GCTGTTGACC TGCAGGACAA CCTGAGCCAC TTCTACATGC AGATTAAAGT ACAGGAATTG
CTGTATCTCA TATTTCATAA GCTATCAACA CGCGAAAATA CCCCGCAACA GCACATCAAC
AACGCTGATG CAGCCAGACT ACTCCATATC CGTAATGAGA TCATCCGCGA CCTTAGTGTG
CCTCCCGTAT TAGGCGAACT GGCCCAGATC GCAGCCATGA GCGAAACCAA ACTTAAACAG
CTTTTTAAGC AGGCTTTCGG CGCCACCATC TATAACTATT ACCAGCAGGC AAGAATGGAA
GAAGCAGCCT TTCTGTTAAA ACAAGGTAAG CATTCTGTTG CAGAGGTAGG CTATGAAATG
GGCTTTTCTA ATCTGAGTCA CTTTAGCAGG GTGTTTGAAA AACACTATGG ATTAAATCCG
AAGAAATTCT CCTACTCCTG A
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| Protein sequence | MIFSFSATAD FDFMTYFARH IGATVNDNLL VIPAYLGEGS INKLDFGPDF KITIHRYLLK
EDLVIKRNTS GQGNDLITIF FYSNEQPLGI AYNDDPYVQF SQREDSAIQV TSNDLSSTIR
FPANHSIHYM VVAIKPPYLN ALLASNQLNS TLQTITGSGN SFLYFERMTA ETKLLLKNLS
AVDLQDNLSH FYMQIKVQEL LYLIFHKLST RENTPQQHIN NADAARLLHI RNEIIRDLSV
PPVLGELAQI AAMSETKLKQ LFKQAFGATI YNYYQQARME EAAFLLKQGK HSVAEVGYEM
GFSNLSHFSR VFEKHYGLNP KKFSYS
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