| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4345 |
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| Symbol | |
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| ID | 8360518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5401755 |
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| End bp | 5402642 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966506 |
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| Product | NmrA family protein |
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| Protein accession | YP_003123994 |
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| Protein GI | 256423341 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.186439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00424146 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAATTA TAACAACAGG CTCACTAGGC AATGTGGCTA CACCAGTAGT AAAGCAATTA
ATTGAAGCAG GTCATGACGT AACCGTTATC ACCAGCAATC CAGATAAAAA GAGCGCTATA
GAGTCATTAG GCGCTGTAGC AGCAGTAGGC TCCATCACTG ACACCTCCTT CTTAATAACA
ACCTTTAAAG ACGCGGATGC CGTCTATGCA ATGATGCCTC CTGCGATGGG GGCTACCAAC
ATGATTGAAA ATATTACCCG CGCCGGAGAA GCATATGCTG CCGCTATCAG CAATAATAGC
ATTCAACGCG TGGTCTTCCT GAGCAGCGTT GGTGCAGATG CAGCCGAAGG TACCGGTCCT
GTACAAGGAG TGCATCGTGC AGAACAGCTA TTACAGCAAT TATCCGGTGT AAACGTGACC
GTGCTGAGAT CCGGCTTCTT TTTCGTTAAC TTCCTACGGG ATATTCCCCT GATTAAAACG
AGGAATATTT TCGGAAATAA CTATGACGGA GATACCAAAC TGGCGCTGAC TCACCCTGTG
GATCTGGCAG CTGCCATTGT CAGGGAACTT CAGCAGGATG GAAACGGCTT TGAAGTAAAG
TATGTTGTCA GTGATATTTC GACAGGCAAT GAAGTAGCGA CCCTGTTTGG TCAGGCTATC
GGCAAACCTG AATTATCCTG GACATTTATC CCGGATGAAC AGTTACAGCA AGGAATGGCG
GCCGCAGGTC TTTCTACCGA ACTGGCAGGA TTAATTACTG AATTAGGTCA GGGCGTAAGA
GCCGGCATTA TTACCAAAGA CTTTTTTGAT AAAGGTGCAA TCGTGACCGG CAGTACGAAA
TTGCAACAAT TTGTAGAGGA GTTTAAGGCC AGGTATCAGC AGGCTTAA
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| Protein sequence | MKIITTGSLG NVATPVVKQL IEAGHDVTVI TSNPDKKSAI ESLGAVAAVG SITDTSFLIT
TFKDADAVYA MMPPAMGATN MIENITRAGE AYAAAISNNS IQRVVFLSSV GADAAEGTGP
VQGVHRAEQL LQQLSGVNVT VLRSGFFFVN FLRDIPLIKT RNIFGNNYDG DTKLALTHPV
DLAAAIVREL QQDGNGFEVK YVVSDISTGN EVATLFGQAI GKPELSWTFI PDEQLQQGMA
AAGLSTELAG LITELGQGVR AGIITKDFFD KGAIVTGSTK LQQFVEEFKA RYQQA
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