| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4341 |
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| Symbol | |
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| ID | 8360514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5398445 |
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| End bp | 5400169 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644966502 |
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| Product | circadian clock protein KaiC |
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| Protein accession | YP_003123990 |
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| Protein GI | 256423337 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
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| TIGRFAM ID | [TIGR02655] circadian clock protein KaiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.213757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00291063 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCCGTT TAATAAAAAG CAAACACGAG CAGGCTTTAG TAAAGAAACC GACTGGTATT
ACCGGATTTG ATGAAATCAC AGGAGGAGGT CTGCCTGAGG GCCGTCCGTC ACTGATTTGC
GGTGAGGCCG GGGCGGGAAA GACACTTTTC TCGATCGAAT TCCTTATCAG GGGCGCTACT
CAGTTTGATG AGCCTGGTGT TATTATGACA TTTGAGGAAA AAGCAGACGA CCTTGAAAAA
AATGTGCTTT CATTGGGCTT CGATTTAAAA AAGTTACAAA AACAAGGTCT GATATGGATC
GATCATGTAC ATATTGACCG GACCGAAATT GAAGAGACTG GCGAATATGA TCTGGATGGT
TTGTTCATAA GACTTGGCCA TGCCATTGAC AGCATTGGTG CCAAAAGAGT AATGCTTGAT
ACCATTGAGA ACCTGTTTAG TGGCTTATCG AACGAAGGTA TCTTACGCGC TGAGTTACGA
AGATTATTCA ACTGGTTGAA AGAAAAAGGA GTAACGACCA TAATTACCGC GGAAAGGGGA
AAGGACTCGC TGACCCGGCA GGGATTAGAG GAGTATGTGT CAGATTGTGT TATTCTGCTT
GAACATCGTG TGATCAATCA TATTTCTACC AGACTTCTTC GTGTTGTGAA GTATAGAGGC
TCTTTACATG GTACAAATGA ATACCCGTTT TTAATTGATG AGGAGGGATT TTCTGTCCTT
CCGGTTACTT CACTGAGGCT GGACAATGCA GTTTCCTCAC AGCGCATTTC ATCGGGCATT
CCTTCGCTTG ATGCAATGTT GGGTGGGAAC GGATTTTTCA GAGGCAGCTC TATACTGGTT
TCAGGTACTG CCGGAACTGG TAAAACGAGT ATTGCGACCT ACTTTGCAGA TGCGTCCTGT
AAGAGAAAGG AAAAGTGCCT GTATTTTGCA TTTGAAGAAT CTCCCAGACA GATTGTTCGT
AATATGAACT CAATAGGGAT CGATCTCCAG AAGCATATGG ATGCAGGATT GCTGGAAATT
CATTCTTCCA GACCAACCTT ATACGGTCTG GAAATGCATT TGGTGGCTAT TCATAAAGTA
ATCAGAAAGT TTAGACCACG TACAGTGATC ATTGATCCTA TTACCAATCT TATTACGATT
GGTTCGATGT CAGAGGTGAA GTCAATGTTG ATAAGACTTA TAGACTTTCT TCAATCGGAA
AATATTACAG TGATCTTTAC TGCCCTGGTA TTTGAAAAAG AACCATCTAC TCAGACTGAT
GAAGGCGTCT CTTCTCTGGT AGATGCCTGG ATACTGGTAA GGGATATTGA GTCTAATGGA
GAAAGGAACC GTGGTATTTA TATCATGAAA GCCCGGGGAA TGGACCATAG TAATCAGGTC
AGGGAATTTG TGATAAAAGA TACCGGGTTA GAGTTGATAG ACGTTTATTT AGGTCCAAAT
GGTATTCTTG TTGGCTCTGC CCGTAAAGCG CAGGAGTTGA CGGAAGCCAC AGGTGTCGAA
ATGCGTACAC ATGCTATTAC CCGTAAGGAC CGAGAGGTCG AAAGAAAGAA ATTGGTACTT
GAAGCAAAAA TTGCTTCACT AAGAGAGGAA TTTGAGTCTG TGCAGGATGA ACTGAATAAA
ACGTTTCTGG AAGAAGAACT GACAAATGCT ATTATGGCAA AAAACAGGCA GGAATTAACC
AACAATCGTA CTAACCGAAA ATCTGCCAAT GGTAAAAGGA AATAA
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| Protein sequence | MARLIKSKHE QALVKKPTGI TGFDEITGGG LPEGRPSLIC GEAGAGKTLF SIEFLIRGAT
QFDEPGVIMT FEEKADDLEK NVLSLGFDLK KLQKQGLIWI DHVHIDRTEI EETGEYDLDG
LFIRLGHAID SIGAKRVMLD TIENLFSGLS NEGILRAELR RLFNWLKEKG VTTIITAERG
KDSLTRQGLE EYVSDCVILL EHRVINHIST RLLRVVKYRG SLHGTNEYPF LIDEEGFSVL
PVTSLRLDNA VSSQRISSGI PSLDAMLGGN GFFRGSSILV SGTAGTGKTS IATYFADASC
KRKEKCLYFA FEESPRQIVR NMNSIGIDLQ KHMDAGLLEI HSSRPTLYGL EMHLVAIHKV
IRKFRPRTVI IDPITNLITI GSMSEVKSML IRLIDFLQSE NITVIFTALV FEKEPSTQTD
EGVSSLVDAW ILVRDIESNG ERNRGIYIMK ARGMDHSNQV REFVIKDTGL ELIDVYLGPN
GILVGSARKA QELTEATGVE MRTHAITRKD REVERKKLVL EAKIASLREE FESVQDELNK
TFLEEELTNA IMAKNRQELT NNRTNRKSAN GKRK
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