| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4330 |
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| Symbol | |
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| ID | 8360503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5386609 |
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| End bp | 5387526 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644966491 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003123979 |
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| Protein GI | 256423326 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0359782 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTAAAA CCGGGAAAGG CTACTTTTGT ACTATGAAGC ATGTGCCGGT ACATAAATTA
CAGGACAGAA GCAGCCTTGG GTTCCAGCTG AAACCATTCT CCCCGGAAAC GGCTGAGCAC
AGGCAATCCG TCGATACTGG CGCACATCGG GATGATCATT ATATATTCTT CATCGTGACC
GAAGGGGCAG GGACCACTAT TGTAGATTTT GAGGAAAAAA CGGTTGGTCC TCATCAGCTC
TATTATATCC TGCCAGAACA AATACACTAT CGCATTCAAT CACATCAGGC AAAAGGATGG
TTTATAGCGG CAGACCCTGC TTTGGTTCCT CCTGCATGCA GGGATATTAT TGAAAGCTGG
TCGGGTTTCC AGGATCCGCT TACATTATCA GTGGATGAAA TAGCGGATTA TGACGGGTTG
CTGCATGTAC TCCATCGTCG GACATCCAGA CAACAGGCGC ATGGCCGTAT AGCAGTGTTA
CACGCGTTAT TAAGGTCTTT CTTTGAGATG GTGGCAGGTA CAATTCGTAT GTATTCAAAA
GTGGAAACAG ATAATTCCAG ACCGGCCATA TTATCGATGG ACTTTAAGAA ATTGTTGAAG
GAAAATATAG TCGCCTATAA AAGTCCGGCT GACTATGCGG ATATGTTACA CGTCTCAGCG
CCTTATCTCA ACGAAGCCGT AAAGAAAATA ACGGGATCCA CCGTATCATT CTGGATCAGA
TTTACCCTCC TCACCGAAGC CAAACGACTA TTGTATTTTA CCAATCTGAG TGTAAAACAG
ATAGCCGCTG ATCTTGGCTT TGAAAACCAT TCTTATTTTT CCCGCCTTTT CTATAAGGAA
ACCGGTATGA CGGCACTTAC TTTTCGTAAG AAATTCAAAG GCGATAATAA AACGGAAGGG
GAGATGACCA TTTTCTGA
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| Protein sequence | MCKTGKGYFC TMKHVPVHKL QDRSSLGFQL KPFSPETAEH RQSVDTGAHR DDHYIFFIVT
EGAGTTIVDF EEKTVGPHQL YYILPEQIHY RIQSHQAKGW FIAADPALVP PACRDIIESW
SGFQDPLTLS VDEIADYDGL LHVLHRRTSR QQAHGRIAVL HALLRSFFEM VAGTIRMYSK
VETDNSRPAI LSMDFKKLLK ENIVAYKSPA DYADMLHVSA PYLNEAVKKI TGSTVSFWIR
FTLLTEAKRL LYFTNLSVKQ IAADLGFENH SYFSRLFYKE TGMTALTFRK KFKGDNKTEG
EMTIF
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