| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4328 |
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| Symbol | |
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| ID | 8360501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5384741 |
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| End bp | 5385493 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644966489 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003123977 |
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| Protein GI | 256423324 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0215528 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATT CAAAAATTGC ATTGGTCACA GGCGGTAGCC GGGGCATTGG TCAGAATATT
GCATTAAGCC TGGCACAGAA AGGTAACGAT GTCATCATAA CATATCTCAG TAACAAGGCA
AGTGCAGATG AAACAGTAGC CGCTATTCAG GCACTTGGGC GTAAGGCGGC CGCCTTACCA
CTTAACACAT CAGATATTAA AGGTTTCGAT GCTTTCACAG ACCAGCTAAG CAAAACATTA
AATACCACAT TTGGAAAGCC CCGGCTGGAT TTTCTGATCA ATAATGCGGG TACCAGTTTG
CAGTCACCGA TTACTGCTGC TACGGAAAGC CAGTTTGACG AGATGATGAA TATTCATCTG
AAGGGTGTTT ATTTCCTCAC ACAAAAGATG TTACCATTGT TACAGGATGG CGGAAGGATC
GTCAATATCT CTTCTGCAGT ATCAAGGATC TCTTATCCGG GTGTGTCAAT TTATGGGATC
ATGAAGGGCG GAATGGACGT ATACACACGT TACCTGGCGG CAGAACTGGG TACAAGAGGT
ATATCTGCTA ATGTGGTAGC ACCGGGAGCG ATCTTTGGTG GTGGGGCCAT GGAAGACAAT
CCTGATATCC GCAGGTTTGT AGAAGGTATA ACAGCCCTGG GCCGTGTTGG TTTACCTGAT
GATGTTGGCG GTGTGGTAGC CTTTCTCTGT AGCGATGATG CAAAATGGGT GAATGGTCAG
CGTATTGAAG TAACCGGTGG TGTCGGATTG TAA
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| Protein sequence | MSDSKIALVT GGSRGIGQNI ALSLAQKGND VIITYLSNKA SADETVAAIQ ALGRKAAALP
LNTSDIKGFD AFTDQLSKTL NTTFGKPRLD FLINNAGTSL QSPITAATES QFDEMMNIHL
KGVYFLTQKM LPLLQDGGRI VNISSAVSRI SYPGVSIYGI MKGGMDVYTR YLAAELGTRG
ISANVVAPGA IFGGGAMEDN PDIRRFVEGI TALGRVGLPD DVGGVVAFLC SDDAKWVNGQ
RIEVTGGVGL
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