Gene Cpin_4322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4322 
Symbol 
ID8360495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5379974 
End bp5380408 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content43% 
IMG OID644966483 
Productputative signal peptide protein 
Protein accessionYP_003123971 
Protein GI256423318 
COG category[S] Function unknown 
COG ID[COG4731] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.338595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0273369 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAA TATGCTTTGC AGCGCTTATG CTGCTGTTAT CAATGGCATC ATTTGCCCAG 
AAATTATCAC CGGACCAAAT CCTTGGTATA TGGCAATGCG ACGAATATAA AATAGAAATT
TTCAAGTCGG GCAACAGCTA CGCTGCTAAG CTCTTATGGG CAAAGGATCT ATTTGAAGCA
GATGGAAAAA CGCCTAAGAA AGACACCAAA AATCCGAACG AGCAACTAAG AAGCCGATCC
AGACAAGGCA TTACACATAT CACGGAGCTG ATGTACAAGA ACGGTGAATA CGTGGACGGT
AAATTATACA GTGTCCAGGA TGGGAATACA TACAGTCTGA AAGGTGCACT TAAAAGTATC
AACGAGCTTG AAACACGCGG TTACAAAGGC ATCCCGATGA TGGGTAAAAC CTTCCGTTGG
AAACGCGTCC AATAG
 
Protein sequence
MKRICFAALM LLLSMASFAQ KLSPDQILGI WQCDEYKIEI FKSGNSYAAK LLWAKDLFEA 
DGKTPKKDTK NPNEQLRSRS RQGITHITEL MYKNGEYVDG KLYSVQDGNT YSLKGALKSI
NELETRGYKG IPMMGKTFRW KRVQ