| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4312 |
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| Symbol | |
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| ID | 8360485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5371781 |
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| End bp | 5372806 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966473 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_003123961 |
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| Protein GI | 256423308 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.558578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0371472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAAAAG AAGTATTACT GACAGGCGTT TCCGGCTTCC TGGGATCTCA CACGACGATT
CAGCTCTTAA ATAAAGGTTA CAAGGTTACA GGCACACTTC GGAATGCCAG CCGTATCAGC
GAATTACAAC AAATTATTGG TAAACATACC CCCTACATTA ACAATCTCAC CTTTGTGGAG
GCGGACCTGT CTGATGAAAA AATCTGGCAG GAATTAACCA GTGGCAAAGA TTTCATTCAA
CACGTTGCTT CACCGTTCCC GTTAGTCTCA CCCAAAAATG AGGACGATGT CATTCAACCG
GCTAAACAAG GAACGCTTGC CATACTCAAG GCAGCCGCTA ACAATAACGT TAAACGCGTT
GTACTGACTT CGTCTTCCAG TAGCGTACTG CATGGTAAAC CACGAGGAAA AGAAAATGGT
ACTTTTGACG AATCCGTCTG GGCCGACGAA AATAACCGTG CAGACCTGAA TACCTACTAC
CGCAGTAAAG TCATAACAGA GAAAGCTGCC TGGGAATACG TGAAACAGCA CGCTCCGCAA
ATGGAACTGG TGACGGTACT GCCAGGCGCT ATACTAGGTC CCGCATTGGA AAATGACTAC
GGAAATTCAG CAGGGATCAT CCTGAAGATG ATGGATGGGA GTTTACCTGC CATGCCGCAG
ATAGGATTTG ATATAGCAGA TGTCAGGTCC GTAGCTGATC TGTTAATACT TGCGATGGAG
AAACCTGCCG CCGCCGGACA ACGTTTCCTC GGCACATCCG GATTTTTGAC TATGAAAGAG
ATTGCTGTTA TATTGCGTAA GAAGTACCCT GCGAGGAAGA TTCCTAAGGG GCAGTTGCCG
GTTTGGTTTA CGCATCTGCT GAGCTGGTTC GACAAATCAT TGCAACCGGT AATGCTTGAC
CTGGGTAAAA CACGTAAAGC GAATAGCGCC AAAGCAAGGA AAATGCTCGG CTGGGAACCA
ATCAATAACG AAGATGCAAT CATCTCCTGC TCGGAAAGCC TGCTTTCCCT GGATCTCATA
AAATAG
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| Protein sequence | MTKEVLLTGV SGFLGSHTTI QLLNKGYKVT GTLRNASRIS ELQQIIGKHT PYINNLTFVE
ADLSDEKIWQ ELTSGKDFIQ HVASPFPLVS PKNEDDVIQP AKQGTLAILK AAANNNVKRV
VLTSSSSSVL HGKPRGKENG TFDESVWADE NNRADLNTYY RSKVITEKAA WEYVKQHAPQ
MELVTVLPGA ILGPALENDY GNSAGIILKM MDGSLPAMPQ IGFDIADVRS VADLLILAME
KPAAAGQRFL GTSGFLTMKE IAVILRKKYP ARKIPKGQLP VWFTHLLSWF DKSLQPVMLD
LGKTRKANSA KARKMLGWEP INNEDAIISC SESLLSLDLI K
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