Gene Cpin_4310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4310 
Symbol 
ID8360483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5370241 
End bp5371170 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content45% 
IMG OID644966471 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003123959 
Protein GI256423306 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.680972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0221146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC TACTATCGCT TTTATTTGCC ATTGCCTTTT TACTGCCAGC CCGTAGTAAT 
ACCATACAGG ACAGCAAACC AGCCGCTCCT CCGGCTAATT TTAAACACGC TTACGCAAAA
GTCAATGGTA TAAATATTCA CTACGTGATC GGCGGCTCAG GTGAACCACT TGTCTTACTG
CACGGATTTG GCCAGAACTG GTACATGTGG AACCGTTTAT TACCTGAATT ATCCAAACAT
TTTACTGTAA TAGCACCTGA CCTCCCGGGC CTGGGTGAAT CCGGTAAACC CGCTGGTGGC
TATGATAAAA AAACAATGGC TACTTATATT CATGGCGTGG TAAAAGAACT CGGCTACAAC
CACATCAAAC TGGCAGGACA CGATATTGGT CTGATGGTGG CCTATGCTTA TGCCGCACAG
TATTCAGATG AAGTAACAAA ACTCGCATTA ATGGATGCAT TGTTACCTGG CGTTGAACCA
GTATGGAGTC AGGTAAAAGG AGCAGCCTGG TGGTTTGGCT TCTTCTCCTT CCCTGCTTCA
GGCGAATTGG TAGCTGGCAG GGAACGTTTA TTCCTTACTA ATTTCTGGCC GGTAGTCGGA
CATGCAAAAG ATCCGTTTAC CCCTGAAGAA GTGAATGAAT TTGTAAGAGC TTATTCTACA
AAAGGATCAA CAACGGGCGC ATTCCATTGG TTCGGCGCCT TCGAGCAGGA CGCTAAGGAC
AATCAGGAGT TCATGAAAAC CAAGTTGAAA ATGCCTTTGC TCGCTATGGG CGGTGAATAC
TTTGGCGCTG CTTTCCTGGA GGATCATTGT AAATTGGTAG CAGAACACGT ACGGGGTGCT
AATATCAAGG GATCAGGCCA TTGGGTAGTA CAGGAGAATA CCGCACAGGT GCAAAAGGAA
TTATTGGATT TTTTTCTTGA TAAAAAATAG
 
Protein sequence
MKKLLSLLFA IAFLLPARSN TIQDSKPAAP PANFKHAYAK VNGINIHYVI GGSGEPLVLL 
HGFGQNWYMW NRLLPELSKH FTVIAPDLPG LGESGKPAGG YDKKTMATYI HGVVKELGYN
HIKLAGHDIG LMVAYAYAAQ YSDEVTKLAL MDALLPGVEP VWSQVKGAAW WFGFFSFPAS
GELVAGRERL FLTNFWPVVG HAKDPFTPEE VNEFVRAYST KGSTTGAFHW FGAFEQDAKD
NQEFMKTKLK MPLLAMGGEY FGAAFLEDHC KLVAEHVRGA NIKGSGHWVV QENTAQVQKE
LLDFFLDKK