Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4310 |
Symbol | |
ID | 8360483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5370241 |
End bp | 5371170 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644966471 |
Product | alpha/beta hydrolase fold protein |
Protein accession | YP_003123959 |
Protein GI | 256423306 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.680972 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0221146 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC TACTATCGCT TTTATTTGCC ATTGCCTTTT TACTGCCAGC CCGTAGTAAT ACCATACAGG ACAGCAAACC AGCCGCTCCT CCGGCTAATT TTAAACACGC TTACGCAAAA GTCAATGGTA TAAATATTCA CTACGTGATC GGCGGCTCAG GTGAACCACT TGTCTTACTG CACGGATTTG GCCAGAACTG GTACATGTGG AACCGTTTAT TACCTGAATT ATCCAAACAT TTTACTGTAA TAGCACCTGA CCTCCCGGGC CTGGGTGAAT CCGGTAAACC CGCTGGTGGC TATGATAAAA AAACAATGGC TACTTATATT CATGGCGTGG TAAAAGAACT CGGCTACAAC CACATCAAAC TGGCAGGACA CGATATTGGT CTGATGGTGG CCTATGCTTA TGCCGCACAG TATTCAGATG AAGTAACAAA ACTCGCATTA ATGGATGCAT TGTTACCTGG CGTTGAACCA GTATGGAGTC AGGTAAAAGG AGCAGCCTGG TGGTTTGGCT TCTTCTCCTT CCCTGCTTCA GGCGAATTGG TAGCTGGCAG GGAACGTTTA TTCCTTACTA ATTTCTGGCC GGTAGTCGGA CATGCAAAAG ATCCGTTTAC CCCTGAAGAA GTGAATGAAT TTGTAAGAGC TTATTCTACA AAAGGATCAA CAACGGGCGC ATTCCATTGG TTCGGCGCCT TCGAGCAGGA CGCTAAGGAC AATCAGGAGT TCATGAAAAC CAAGTTGAAA ATGCCTTTGC TCGCTATGGG CGGTGAATAC TTTGGCGCTG CTTTCCTGGA GGATCATTGT AAATTGGTAG CAGAACACGT ACGGGGTGCT AATATCAAGG GATCAGGCCA TTGGGTAGTA CAGGAGAATA CCGCACAGGT GCAAAAGGAA TTATTGGATT TTTTTCTTGA TAAAAAATAG
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Protein sequence | MKKLLSLLFA IAFLLPARSN TIQDSKPAAP PANFKHAYAK VNGINIHYVI GGSGEPLVLL HGFGQNWYMW NRLLPELSKH FTVIAPDLPG LGESGKPAGG YDKKTMATYI HGVVKELGYN HIKLAGHDIG LMVAYAYAAQ YSDEVTKLAL MDALLPGVEP VWSQVKGAAW WFGFFSFPAS GELVAGRERL FLTNFWPVVG HAKDPFTPEE VNEFVRAYST KGSTTGAFHW FGAFEQDAKD NQEFMKTKLK MPLLAMGGEY FGAAFLEDHC KLVAEHVRGA NIKGSGHWVV QENTAQVQKE LLDFFLDKK
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