| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4291 |
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| Symbol | |
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| ID | 8360464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5351159 |
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| End bp | 5354023 |
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| Gene Length | 2865 bp |
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| Protein Length | 954 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644966453 |
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| Product | histidine kinase |
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| Protein accession | YP_003123941 |
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| Protein GI | 256423288 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.608548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.104271 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGTA TCGGACAAAA GCAGGAATTT ATACCATTCA GAAGTTACAG CCAAAGCTCG
GGGTTAACGA GTTATAATAT AACAAAGATT CTCCAGGATA AGTTCGGTTT TATTTGGATA
GGTACACAAG ACGGACTTAA TTGTTTTGAT GGTAAAAACT TTCTCATCTT CAACCGGGAA
ACCAATTCCC GTAGAACCCT GCATGGGAAC AATGTGACAG ATATCACAGA AGATACCGCC
CGTCATTTGA TATGGGTGGC TACCTCCTAT GGCGGACCAA CAGGTATAGG TACTATCTCT
CATGTAGTGT CCCATCAACT TAGTGGTACC GCGCAGACAG TACTGGCTGA TAAGTGGGTC
AGGAGTCTGG CTATTAGGGG TAAGATGATG GCTATAGGCA CCTACGAAGG ATTGTATATG
TATGATCTGG AGTCGGGAAG AATACAGTTA TCAGCTTCTG AACTGAATGT CAGTAAACTG
CTGACTGACG CGTCAGGAAA TATCTGGGCT TTTTGTGATA ATCACGGTGT ACTGATCATA
AACGGGAATA CAGGCCGCCC GCTCACTAAT ATCACACTGC GTATTCCCAA TCTTCTTTTC
TGGGATGTCA CCATAAATGG GCATGTCATT TACGCGGCTA CGAGTAAAGG GTTGAAGAAG
TTCGATGTAA ACAGGATGCA GCTGGTCAAT ACAGAAATGG GTCCTTTTCT TCCGGATGAA
GAATTTTTTA GCTGTGCTGC TGACAATAAA GGTCAGTTAT GGGTCGCCAA TGCACATAGT
CTATATCGAT ACAACGGCAG CTGGAGCCGG ATAAAGGACG TTAATTTTGA AGTGGACAGC
TGGCAAAGCG CTATCTATGA AATATTCATT GACCGCGAAG GTAATACCTG GCTTGGTTCA
CAGGAAGGAC TGGCATATCT GTCTAATCAG CGGCGCCCTT TTGAAAAGTA TTACCGGTCT
ATTCATTCAT CCGTCAAAAT ACAACATGCT TTTTCGATCT TCAATGACGA TAATAAGGCC
ATCTATTGCG GCGCAGCCAA CGGTTTGTAT CAAGTGCATC CGGATAGCCG ATCTATAGAA
AGGATAGACA GCAGCAGTTC CAATTATTTG GTTACGCGCC TACCAGATCA GGAAATACTG
GTATCTAACA GCAAAGGATG CGCTATTGTG CGTCAACAGC AGTTAATACC TGTGGGAGAG
GTTTATCCTT CACTACGCGC CTTACAACCA GAATTACTTA GTAGTGCTGT ACAATATAAT
GATTCGGTCA TGGTGTTTGG CAGCCAGTTA CACAAAGGGC TGTATATCTG GAATACGCGT
GCAAGGACAT TACGAGTAAT TAATGGACGG AATAGTAAGC TGCGCCTGGA CAACGATATC
ATCAATGCCT TGTATAAAGA TAAGAAGGGC CAGTTATGGG TATTATCAGA AGAGCAACTA
TTTCTCCTGG ATCCATTAAC AGATAGCTGT ACCTCATTTC GCTTTCAAAG AATCTTATTT
GATATGTGCG AAACCAGTAA TGGCTACTGG ATCGCTGCTT ACGGAACAGG CATTATCGAA
ACCGACCGAC AGTTACGCGT GCGCAGGATC ATATCTGCTA AGGAAGGATT GAGTAATAAC
GGAGTATATA AGATCTTTCC GTACCGCGAC AGTCTGATAG CCGTCACTTC TAATAATGGA
CTGTCTGTAC TGGATATATC AGGTAAGCGG ATACGGAACT ATTATCAACA GGATGGACTA
CATTCCAGTG GTTTCGAACA GTTCTGTGGG ACCCGTGATA AACAAAGTTT CTATGCAGGT
GGTGTAAATG GCTTTACGCA GGTTTTTCCG GCCTATTTTT CCGTCAATCA CCAACCGCCG
GCATTATATA TCACCCGTGT GAATAGTGAG ACCCGGAATG GGATACTAGA CACTACCGAT
CTGCAACTTT CCTCTATTGA AATTCCCAAT AATGTGCTAC AAACCACGAT CAACTTCGCA
GCGCTGAATT TCCAGCATCC GGAGAGTACT ACTTATAGCT ACCGGATTGC AGAACAAGAA
GGAGGTTGGA TCAACCTGGG CTCGCAACAT TTCCTGAACT TCACCGGTAT GCAGCCGGGT
AAATATACCC TGTTACTGAG GGCCGCTAAT GAAGATGGCT ACTGGACACC CGAGCCAGTC
AGACTCACTC TAATATTTCT GCCTAAATGG TATCAGACTA ACTGGTTTAA GGGAATGATA
TTGTTGATGA TCGGTGGGAT ATTCTATGCT TTGTACAGAT ATCGCCTGGC CCAATTAAAA
AAGCAGGTCG CTATCAGAAC GGGAATCGCC AGTGATCTGC ATGATGATCT TGGAAGTACC
CTGAATAGCG TGAAGGTACT GACCCACCTG GCTAAACGAG AGCCGGAACA ACCTGAACAC
CTGAATCAGA TAGAAAATGC TATTACGCAG GCAGCGGCTG GTTTGCGTGA CCTCATATGG
GTATTAGACG ATGCACAGGA TACCATTTAT GAGCTATCTG AAAGGATACG GAAGTTTGCC
CTGCCATTGA CCAATGCACA TCATATACAG CTGGAATGTA TTATAACAGC GGAAAGCAAT
GACCTCCCCA TTTCTAAAAC ACAGAAGAGA AATCTATACC TGATTGCCAA GGAGGCGATC
AATAACAGTA TTAAATATGC TGATTGCGAT CGTATACAGG TGGTGCTGAG ACAAGGGAAT
AAGTCAGTGT CACTGCGCAT CGAAGACAAT GGGAAAGGCT TCGAAATGAC GTCTGTTCAG
CGGGGGAATG GTCTGAGGAA TATTGTGCAG CGTGCGAAGC AAATGAACAC TCATGCGGAT
ATTTATAGTA AGCCGGGAGA GGGAACGATT ATACATATTG TTTAA
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| Protein sequence | MNSIGQKQEF IPFRSYSQSS GLTSYNITKI LQDKFGFIWI GTQDGLNCFD GKNFLIFNRE
TNSRRTLHGN NVTDITEDTA RHLIWVATSY GGPTGIGTIS HVVSHQLSGT AQTVLADKWV
RSLAIRGKMM AIGTYEGLYM YDLESGRIQL SASELNVSKL LTDASGNIWA FCDNHGVLII
NGNTGRPLTN ITLRIPNLLF WDVTINGHVI YAATSKGLKK FDVNRMQLVN TEMGPFLPDE
EFFSCAADNK GQLWVANAHS LYRYNGSWSR IKDVNFEVDS WQSAIYEIFI DREGNTWLGS
QEGLAYLSNQ RRPFEKYYRS IHSSVKIQHA FSIFNDDNKA IYCGAANGLY QVHPDSRSIE
RIDSSSSNYL VTRLPDQEIL VSNSKGCAIV RQQQLIPVGE VYPSLRALQP ELLSSAVQYN
DSVMVFGSQL HKGLYIWNTR ARTLRVINGR NSKLRLDNDI INALYKDKKG QLWVLSEEQL
FLLDPLTDSC TSFRFQRILF DMCETSNGYW IAAYGTGIIE TDRQLRVRRI ISAKEGLSNN
GVYKIFPYRD SLIAVTSNNG LSVLDISGKR IRNYYQQDGL HSSGFEQFCG TRDKQSFYAG
GVNGFTQVFP AYFSVNHQPP ALYITRVNSE TRNGILDTTD LQLSSIEIPN NVLQTTINFA
ALNFQHPEST TYSYRIAEQE GGWINLGSQH FLNFTGMQPG KYTLLLRAAN EDGYWTPEPV
RLTLIFLPKW YQTNWFKGMI LLMIGGIFYA LYRYRLAQLK KQVAIRTGIA SDLHDDLGST
LNSVKVLTHL AKREPEQPEH LNQIENAITQ AAAGLRDLIW VLDDAQDTIY ELSERIRKFA
LPLTNAHHIQ LECIITAESN DLPISKTQKR NLYLIAKEAI NNSIKYADCD RIQVVLRQGN
KSVSLRIEDN GKGFEMTSVQ RGNGLRNIVQ RAKQMNTHAD IYSKPGEGTI IHIV
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