Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4288 |
Symbol | |
ID | 8360461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5347424 |
End bp | 5348212 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644966450 |
Product | alpha/beta hydrolase fold protein |
Protein accession | YP_003123938 |
Protein GI | 256423285 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.262225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.18848 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAATA AAAAAGTCAT ATTACTATTG CACGGATACC CGCAAACCAG TTACGCATGG CGGTTTGTAA CGCCTCTCTT AGCAAAAGAA GGATATAAAG TCATAGCTCC TGACTTACCC GGACTAGGCG ATACTGCTAA TCCCGTTTCT TTTGATAAAA AAACAATCGC AGTTCTTATC CATGATATGA TGAAAGCAGA TGGTTATAAT GACATTTATC TTGTCGGACA TGACTGGGGC GCCTCTGTTG CGTATAGCTA TGCTGCACAA TTTGGTGAGG AAGTGAAAAG GCTGGTCCTC ATGGATGTTC CTCCTGTAGG GGAATATCTT AAAAAAACAC CCTTACTCCC ACCCAATAAC AAGGGCCTTT GGTGGTTTGC GTTTCACCAG GTACATCAGT TACCCGAATT ACTCGTCGCA GGGAAGGAAA GAGAATATCT GCAATGGTTT TATCATAACT CTTCGTTCAA AAAAGAGGTA TTTGATAATG ACACTATCAA TGAATACTAC CGAACTTATA GCCAAGCTGA CAAAATGAGC AATGGCTTTA ACTATTACCG CACGATATTA CAGGATATCA ATGATAACAA AGCTTTCGGA CAAAATCTGC TTCAAATGCC CGTATTAGCC ATCGGCGGTG AACATGGGCT CGGTCAGCTC GCTTACAATA TTACCAAACC GCTCGTTGCC GACATTACCG GGGCCGTTAT TCCCGATTGC GGACATTATA TACAGGAAGA ACAGCCGGAT TTCTTAGTAA AAGAACTGAT CCAGTTTTTC AGCAAATAA
|
Protein sequence | MENKKVILLL HGYPQTSYAW RFVTPLLAKE GYKVIAPDLP GLGDTANPVS FDKKTIAVLI HDMMKADGYN DIYLVGHDWG ASVAYSYAAQ FGEEVKRLVL MDVPPVGEYL KKTPLLPPNN KGLWWFAFHQ VHQLPELLVA GKEREYLQWF YHNSSFKKEV FDNDTINEYY RTYSQADKMS NGFNYYRTIL QDINDNKAFG QNLLQMPVLA IGGEHGLGQL AYNITKPLVA DITGAVIPDC GHYIQEEQPD FLVKELIQFF SK
|
| |