| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4287 |
|---|
| Symbol | |
|---|
| ID | 8360460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 5346951 |
|---|
| End bp | 5347310 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644966449 |
|---|
| Product | transcriptional regulator, HxlR family |
|---|
| Protein accession | YP_003123937 |
|---|
| Protein GI | 256423284 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1733] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.332291 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.235494 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA ATGCAGTTTT ATATAAAATA GGGGAAAAAG TGTTTGAATG TCCGGTAGGG
TTAGCTACGA ATGTGATCAA TGGAAAATGG AAACTACAGA TATTGAATTT GCTTTCGCAG
GGTGCGTGTA TGCGGTATGG AGATCTGAAA AGAGGAATTG AGGATGTATC TGAAAAAATG
TTGATACAGC ATTTGAGGGA GTTAGAAGGT GATGGATTGA TAATGCGGAG AGCCTATGGA
GAGGTGCCGC CGAAAGTTGA GTACAGTTTG ACTGAGATCG GAAAGGGGAT TATCCCCGTT
ATAGACGAGC TGAGAAAATG GGGCCTTGGA TTCAAAGTGA CCCGGGAAGC AATGTTATAA
|
|---|
| Protein sequence | MKKNAVLYKI GEKVFECPVG LATNVINGKW KLQILNLLSQ GACMRYGDLK RGIEDVSEKM
LIQHLRELEG DGLIMRRAYG EVPPKVEYSL TEIGKGIIPV IDELRKWGLG FKVTREAML
|
|---|
| |